A Library to Explore Chromatin Interaction Patterns for Topologically Associating Domains
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Aug 4, 2022 - Python
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tad
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Pipeline to implement a "TAD_Pathways" analysis. Discover candidate genes based on association signals in TADs
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Dec 21, 2019 - Python
Snakemake pipeline for analysis and normalization of Hi-C data starting from fastq.gz files. It includes the possibility to perform grouped analyses, TAD, loops and stripes detections, as well as differential compartment and chromatin interaction analyses.
snakemake tad loop hi-c hic hicexplorer compartments selfish snakemake-pipeline dchic stripenn genova
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Mar 5, 2025 - Python
This code plots prime numbers, their position, spin, and rotation in the prime hexagon. See The Prime Hexagon video at: https://www.youtube.com/watch?v=fQL4KRH3wUQ
youtube math tad prime pi numbers hexagon phi hexspin gallion primehexagon primenumbers prime-hexagon
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Feb 12, 2018 - Python
Nextflow workflow to call TAD cliques
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Sep 5, 2025 - Python
Which ESR1 and PGR binding sites are functional?
tad transcription-factor-binding bed-files chipseq transcription-factor-binding-site progesterrone tf-binding-motif chipseq-region estrogen progesterone-resceptor estrogen-receptor hand2 transcription-control
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Dec 11, 2018 - Python
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