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Exclude myelin from synapse target selector #735

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Exclude myelin from synapse target selector #735

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53 changes: 28 additions & 25 deletions src/features/entities/single-neuron-synaptome/build/elements/synapse-set.tsx
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Original file line number Diff line number Diff line change
@@ -1,39 +1,37 @@
'use client';

import { Form, Input, Select, Button, FormListFieldData, InputNumber } from 'antd';
import { useMemo, useReducer, useRef, useState } from 'react';
import { useAtom, useAtomValue } from 'jotai';
import { useParams } from 'next/navigation';
import { Color } from 'three';
import {
CloseOutlined,
DeleteOutlined,
EyeInvisibleOutlined,
InfoCircleFilled,
PlusCircleOutlined,
} from '@ant-design/icons';
import { Button, Form, FormListFieldData, Input, InputNumber, Select } from 'antd';
import { useAtom, useAtomValue } from 'jotai';
import { useParams } from 'next/navigation';
import { useMemo, useReducer, useRef, useState } from 'react';
import { Color } from 'three';

import findIndex from 'lodash/findIndex';
import isEqual from 'lodash/isEqual';
import groupBy from 'lodash/groupBy';

import { SECTION_TARGET_MAPPING } from '@/features/entities/single-neuron-synaptome/build/elements/constants';
import { createBubblesInstanced } from '@/services/bluenaas-single-cell/renderer-utils';
import { synapsesPlacementAtom } from '@/state/synaptome';
import {
validateSingleNeuronSynapseGenerationFormula,
getSingleNeuronSynaptomePlacement,
validateSingleNeuronSynapseGenerationFormula,
} from '@/api/small-scale-simulator';
import { tryCatch } from '@/api/utils';
import { SettingAdjustment } from '@/components/icons/SettingAdjustment';
import { useAppNotification } from '@/components/notification';
import { secNamesAtom } from '@/state/simulate/single-neuron';
import { messages } from '@/i18n/en/synaptome';
import {
sendDisplaySynapses3DEvent,
sendRemoveSynapses3DEvent,
} from '@/components/neuron-viewer/hooks/events';
import { useAppNotification } from '@/components/notification';
import { SECTION_TARGET_MAPPING } from '@/features/entities/single-neuron-synaptome/build/elements/constants';
import { messages } from '@/i18n/en/synaptome';
import { createBubblesInstanced } from '@/services/bluenaas-single-cell/renderer-utils';
import { secNamesAtom } from '@/state/simulate/single-neuron';
import { synapsesPlacementAtom } from '@/state/synaptome';
import { classNames } from '@/util/utils';
import { tryCatch } from '@/api/utils';

import type { TSingleNeuronSynaptomeConfiguration } from '@/api/entitycore/types/entities/single-neuron-synaptome';
import type { WorkspaceContext } from '@/types/common';
Expand Down Expand Up @@ -74,16 +72,21 @@ export default function SynapseSet({
const config = synapses?.[index];
const configRef = useRef(config);

const groupedSections = Object.keys(
groupBy(secNames, (str) => {
const bracketIndex = findIndex(str, (char) => char === '[');
return bracketIndex !== -1 ? str.slice(0, bracketIndex) : str;
})
);

const hasApic = groupedSections.includes('apic');

const targetOptions = groupedSections.map((value) => ({
const neuriteTypeRegexp = /^\w+/;
const neuriteTypes = Array.from(
secNames.reduce(
(acc, secName) => acc.add(neuriteTypeRegexp.exec(secName)?.[0]),
new Set<string | undefined>()
)
)
// Filter out non-matches as a precaution.
.filter((neurityType) => neurityType !== undefined)
// Exclude myelin as it's not meaningful to have at as a synapse target.
.filter((neurityType) => neurityType !== 'myelin');

const hasApic = neuriteTypes.includes('apic');

const targetOptions = neuriteTypes.map((value) => ({
value,
label:
value === 'dend' && !hasApic
Expand Down