{2023.06}[2023b,sapphirerapids] EB 4.9.4 easystack for 2023b #947

bedroge · 2025-02-26T19:35:00Z

1 out of 2 required modules missing:

* SIONlib/1.7.7-GCCcore-13.2.0-tools (SIONlib-1.7.7-GCCcore-13.2.0-tools.eb)


7 out of 49 required modules missing:

* CubeLib/4.8.2-GCCcore-13.2.0 (CubeLib-4.8.2-GCCcore-13.2.0.eb)
* CubeWriter/4.8.2-GCCcore-13.2.0 (CubeWriter-4.8.2-GCCcore-13.2.0.eb)
* OPARI2/2.0.8-GCCcore-13.2.0 (OPARI2-2.0.8-GCCcore-13.2.0.eb)
* SIONlib/1.7.7-GCCcore-13.2.0-tools (SIONlib-1.7.7-GCCcore-13.2.0-tools.eb)
* PDT/3.25.2-GCCcore-13.2.0 (PDT-3.25.2-GCCcore-13.2.0.eb)
* OTF2/3.0.3-GCCcore-13.2.0 (OTF2-3.0.3-GCCcore-13.2.0.eb)
* Score-P/8.4-gompi-2023b (Score-P-8.4-gompi-2023b.eb)


1 out of 10 required modules missing:

* Cython/3.0.10-GCCcore-13.2.0 (Cython-3.0.10-GCCcore-13.2.0.eb)


13 out of 81 required modules missing:

* dill/0.3.8-GCCcore-13.2.0 (dill-0.3.8-GCCcore-13.2.0.eb)
* pyfaidx/0.8.1.1-GCCcore-13.2.0 (pyfaidx-0.8.1.1-GCCcore-13.2.0.eb)
* statsmodels/0.14.1-gfbf-2023b (statsmodels-0.14.1-gfbf-2023b.eb)
* hic-straw/1.3.1-foss-2023b (hic-straw-1.3.1-foss-2023b.eb)
* h5py/3.11.0-foss-2023b (h5py-3.11.0-foss-2023b.eb)
* RapidJSON/1.1.0-20240409-GCCcore-13.2.0 (RapidJSON-1.1.0-20240409-GCCcore-13.2.0.eb)
* utf8proc/2.9.0-GCCcore-13.2.0 (utf8proc-2.9.0-GCCcore-13.2.0.eb)
* Abseil/20240116.1-GCCcore-13.2.0 (Abseil-20240116.1-GCCcore-13.2.0.eb)
* RE2/2024-03-01-GCCcore-13.2.0 (RE2-2024-03-01-GCCcore-13.2.0.eb)
* Arrow/16.1.0-gfbf-2023b (Arrow-16.1.0-gfbf-2023b.eb)
* multiprocess/0.70.16-gfbf-2023b (multiprocess-0.70.16-gfbf-2023b.eb)
* cooler/0.10.2-foss-2023b (cooler-0.10.2-foss-2023b.eb)
* Mustache/1.3.3-foss-2023b (Mustache-1.3.3-foss-2023b.eb)


1 out of 3 required modules missing:

* GDRCopy/2.4-GCCcore-13.2.0 (GDRCopy-2.4-GCCcore-13.2.0.eb)


1 out of 60 required modules missing:

* GROMACS/2024.4-foss-2023b (GROMACS-2024.4-foss-2023b.eb)


5 out of 32 required modules missing:

* typing-extensions/4.10.0-GCCcore-13.2.0 (typing-extensions-4.10.0-GCCcore-13.2.0.eb)
* Rust/1.76.0-GCCcore-13.2.0 (Rust-1.76.0-GCCcore-13.2.0.eb)
* maturin/1.5.0-GCCcore-13.2.0-Rust-1.76.0 (maturin-1.5.0-GCCcore-13.2.0-Rust-1.76.0.eb)
* pydantic/2.7.4-GCCcore-13.2.0 (pydantic-2.7.4-GCCcore-13.2.0.eb)
* SlurmViewer/1.0.1-GCCcore-13.2.0 (SlurmViewer-1.0.1-GCCcore-13.2.0.eb)


5 out of 67 required modules missing:

* SDL2/2.28.5-GCCcore-13.2.0 (SDL2-2.28.5-GCCcore-13.2.0.eb)
* Graphene/1.10.8-GCCcore-13.2.0 (Graphene-1.10.8-GCCcore-13.2.0.eb)
* GStreamer/1.24.8-GCC-13.2.0 (GStreamer-1.24.8-GCC-13.2.0.eb)
* GST-plugins-base/1.24.8-GCC-13.2.0 (GST-plugins-base-1.24.8-GCC-13.2.0.eb)
* wxWidgets/3.2.6-GCC-13.2.0 (wxWidgets-3.2.6-GCC-13.2.0.eb)


2 out of 87 required modules missing:

* EveryBeam/0.6.1-foss-2023b (EveryBeam-0.6.1-foss-2023b.eb)
* DP3/6.2-foss-2023b (DP3-6.2-foss-2023b.eb)


2 out of 83 required modules missing:

* EveryBeam/0.6.1-foss-2023b (EveryBeam-0.6.1-foss-2023b.eb)
* WSClean/3.5-foss-2023b (WSClean-3.5-foss-2023b.eb)


1 out of 81 required modules missing:

* EveryBeam/0.6.1-foss-2023b (EveryBeam-0.6.1-foss-2023b.eb)

I don't see any overlap with #946, which also builds for 2023b. So, should be okay to build this one in parallel.

eessi-bot · 2025-02-26T19:35:04Z

Instance eessi-bot-mc-aws is configured to build for:

architectures: x86_64/generic, x86_64/intel/haswell, x86_64/intel/sapphirerapids, x86_64/intel/skylake_avx512, x86_64/amd/zen2, x86_64/amd/zen3, aarch64/generic, aarch64/neoverse_n1, aarch64/neoverse_v1
repositories: eessi.io-2023.06-compat, eessi.io-2023.06-software

eessi-bot · 2025-02-26T19:35:04Z

Instance eessi-bot-mc-azure is configured to build for:

architectures: x86_64/amd/zen4
repositories: eessi.io-2023.06-software, eessi.io-2023.06-compat

eessi-bot-toprichard · 2025-02-26T19:35:05Z

Instance rt-Grace-jr is configured to build for:

architectures: aarch64/nvidia/grace
repositories: eessi.io-2023.06-software

bedroge · 2025-02-26T19:35:10Z

bot: build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:sapphirerapids

eessi-bot · 2025-02-26T19:35:13Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:sapphirerapids from bedroge
- expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:sapphirerapids
handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:sapphirerapids resulted in:
- submitted job 47880, for details & status see {2023.06}[2023b,sapphirerapids] EB 4.9.4 easystack for 2023b #947 (comment)

eessi-bot · 2025-02-26T19:35:13Z

Updates by the bot instance eessi-bot-mc-azure (click for details)

received bot command build repo:eessi.io-2023.06-software instance:eessi-bot-mc-aws arch:sapphirerapids from bedroge
- expanded format: build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:sapphirerapids
handling command build repository:eessi.io-2023.06-software instance:eessi-bot-mc-aws architecture:sapphirerapids resulted in:
- no jobs were submitted

eessi-bot-toprichard · 2025-02-26T19:35:13Z

Updates by the bot instance rt-Grace-jr (click for details)

account bedroge has NO permission to send commands to the bot

eessi-bot · 2025-02-26T19:35:17Z

New job on instance eessi-bot-mc-aws for CPU micro-architecture x86_64-intel-sapphirerapids for repository eessi.io-2023.06-software in job dir /project/def-users/SHARED/jobs/2025.02/pr_947/47880

date	job status	comment
Feb 26 19:35:16 UTC 2025	submitted	job id `47880` awaits release by job manager
Feb 26 19:35:39 UTC 2025	released	job awaits launch by Slurm scheduler
Feb 26 19:41:02 UTC 2025	running	job `47880` is running
Feb 26 23:23:02 UTC 2025	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-47880.out` ✅ no message matching `FATAL:` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-sapphirerapids-1740610924.tar.gz` size: 787 MiB (825913246 bytes) entries: 54735 modules under 2023.06/software/linux/x86_64/intel/sapphirerapids/modules/all `Abseil/20240116.1-GCCcore-13.2.0.lua` `Arrow/16.1.0-gfbf-2023b.lua` `cooler/0.10.2-foss-2023b.lua` `CubeLib/4.8.2-GCCcore-13.2.0.lua` `CubeWriter/4.8.2-GCCcore-13.2.0.lua` `Cython/3.0.10-GCCcore-13.2.0.lua` `dill/0.3.8-GCCcore-13.2.0.lua` `DP3/6.2-foss-2023b.lua` `EveryBeam/0.6.1-foss-2023b.lua` `GDRCopy/2.4-GCCcore-13.2.0.lua` `Graphene/1.10.8-GCCcore-13.2.0.lua` `GROMACS/2024.4-foss-2023b.lua` `GST-plugins-base/1.24.8-GCC-13.2.0.lua` `GStreamer/1.24.8-GCC-13.2.0.lua` `h5py/3.11.0-foss-2023b.lua` `hic-straw/1.3.1-foss-2023b.lua` `maturin/1.5.0-GCCcore-13.2.0-Rust-1.76.0.lua` `multiprocess/0.70.16-gfbf-2023b.lua` `Mustache/1.3.3-foss-2023b.lua` `OPARI2/2.0.8-GCCcore-13.2.0.lua` `OTF2/3.0.3-GCCcore-13.2.0.lua` `PDT/3.25.2-GCCcore-13.2.0.lua` `pydantic/2.7.4-GCCcore-13.2.0.lua` `pyfaidx/0.8.1.1-GCCcore-13.2.0.lua` `RapidJSON/1.1.0-20240409-GCCcore-13.2.0.lua` `RE2/2024-03-01-GCCcore-13.2.0.lua` `Rust/1.76.0-GCCcore-13.2.0.lua` `Score-P/8.4-gompi-2023b.lua` `SDL2/2.28.5-GCCcore-13.2.0.lua` `SIONlib/1.7.7-GCCcore-13.2.0-tools.lua` `SlurmViewer/1.0.1-GCCcore-13.2.0.lua` `statsmodels/0.14.1-gfbf-2023b.lua` `typing-extensions/4.10.0-GCCcore-13.2.0.lua` `utf8proc/2.9.0-GCCcore-13.2.0.lua` `WSClean/3.5-foss-2023b.lua` `wxWidgets/3.2.6-GCC-13.2.0.lua` software under 2023.06/software/linux/x86_64/intel/sapphirerapids/software `Abseil/20240116.1-GCCcore-13.2.0` `Arrow/16.1.0-gfbf-2023b` `cooler/0.10.2-foss-2023b` `CubeLib/4.8.2-GCCcore-13.2.0` `CubeWriter/4.8.2-GCCcore-13.2.0` `Cython/3.0.10-GCCcore-13.2.0` `dill/0.3.8-GCCcore-13.2.0` `DP3/6.2-foss-2023b` `EveryBeam/0.6.1-foss-2023b` `GDRCopy/2.4-GCCcore-13.2.0` `Graphene/1.10.8-GCCcore-13.2.0` `GROMACS/2024.4-foss-2023b` `GST-plugins-base/1.24.8-GCC-13.2.0` `GStreamer/1.24.8-GCC-13.2.0` `h5py/3.11.0-foss-2023b` `hic-straw/1.3.1-foss-2023b` `maturin/1.5.0-GCCcore-13.2.0-Rust-1.76.0` `multiprocess/0.70.16-gfbf-2023b` `Mustache/1.3.3-foss-2023b` `OPARI2/2.0.8-GCCcore-13.2.0` `OTF2/3.0.3-GCCcore-13.2.0` `PDT/3.25.2-GCCcore-13.2.0` `pydantic/2.7.4-GCCcore-13.2.0` `pyfaidx/0.8.1.1-GCCcore-13.2.0` `RapidJSON/1.1.0-20240409-GCCcore-13.2.0` `RE2/2024-03-01-GCCcore-13.2.0` `Rust/1.76.0-GCCcore-13.2.0` `Score-P/8.4-gompi-2023b` `SDL2/2.28.5-GCCcore-13.2.0` `SIONlib/1.7.7-GCCcore-13.2.0-tools` `SlurmViewer/1.0.1-GCCcore-13.2.0` `statsmodels/0.14.1-gfbf-2023b` `typing-extensions/4.10.0-GCCcore-13.2.0` `utf8proc/2.9.0-GCCcore-13.2.0` `WSClean/3.5-foss-2023b` `wxWidgets/3.2.6-GCC-13.2.0` other under 2023.06/software/linux/x86_64/intel/sapphirerapids no other files in tarball
Feb 26 23:23:02 UTC 2025	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ OK ] ( 1/11) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.4-foss-2023b /b2b72766 @BotBuildTests:x86_64_intel_sapphirerapids+default P: perf: 73.684 ns/day (r:0, l:None, u:None) [ OK ] ( 2/11) EESSI_GROMACS %benchmark_info=HECBioSim/Crambin %nb_impl=cpu %scale=1_node %module_name=GROMACS/2024.1-foss-2023b /02920241 @BotBuildTests:x86_64_intel_sapphirerapids+default P: perf: 74.388 ns/day (r:0, l:None, u:None) [ OK ] ( 3/11) EESSI_LAMMPS_lj %device_type=cpu %module_name=LAMMPS/2Aug2023_update2-foss-2023a-kokkos %scale=1_node /04ff9ece @BotBuildTests:x86_64_intel_sapphirerapids+default P: perf: 617.616 timesteps/s (r:0, l:None, u:None) [ OK ] ( 4/11) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /775175bf @BotBuildTests:x86_64_intel_sapphirerapids+default P: latency: 2.13 us (r:0, l:None, u:None) [ OK ] ( 5/11) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_allreduce %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /52707c40 @BotBuildTests:x86_64_intel_sapphirerapids+default P: latency: 1.83 us (r:0, l:None, u:None) [ OK ] ( 6/11) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node %device_type=cpu /b1aacda9 @BotBuildTests:x86_64_intel_sapphirerapids+default P: latency: 4.0 us (r:0, l:None, u:None) [ OK ] ( 7/11) EESSI_OSU_coll %benchmark_info=mpi.collective.osu_alltoall %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node %device_type=cpu /c6bad193 @BotBuildTests:x86_64_intel_sapphirerapids+default P: latency: 4.11 us (r:0, l:None, u:None) [ OK ] ( 8/11) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /15cad6c4 @BotBuildTests:x86_64_intel_sapphirerapids+default P: latency: 0.39 us (r:0, l:None, u:None) [ OK ] ( 9/11) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_latency %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /6672deda @BotBuildTests:x86_64_intel_sapphirerapids+default P: latency: 0.33 us (r:0, l:None, u:None) [ OK ] (10/11) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.2-gompi-2023b %scale=1_node /2a9a47b1 @BotBuildTests:x86_64_intel_sapphirerapids+default P: bandwidth: 12853.83 MB/s (r:0, l:None, u:None) [ OK ] (11/11) EESSI_OSU_pt2pt_CPU %benchmark_info=mpi.pt2pt.osu_bw %module_name=OSU-Micro-Benchmarks/7.1-1-gompi-2023a %scale=1_node /1b24ab8e @BotBuildTests:x86_64_intel_sapphirerapids+default P: bandwidth: 12929.81 MB/s (r:0, l:None, u:None) [ PASSED ] Ran 11/11 test case(s) from 11 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-47880.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Feb 27 06:37:47 UTC 2025	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-sapphirerapids-1740610924.tar.gz` to S3 bucket succeeded

eessi-bot-toprichard · 2025-02-27T06:37:23Z

Label bot:deploy has been set by user ocaisa, but this person does not have permission to trigger deployments

eessi-bot · 2025-02-27T08:03:10Z

PR merged! Moved ['/project/def-users/SHARED/jobs/2025.02/pr_947/47880'] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2025.02.27

eessi-bot · 2025-02-27T08:03:10Z

PR merged! Moved [] to /project/def-users/SHARED/trash_bin/EESSI/software-layer/2025.02.27

add EB 4.9.4 easystack for 2023b

f73f52d

bedroge added 2023.06-software.eessi.io 2023.06 version of software.eessi.io sapphirerapids labels Feb 26, 2025

bedroge added the ready-to-deploy Mark a PR as ready to deploy label Feb 27, 2025

ocaisa added bot:deploy Ask bot to deploy missing software installations to EESSI and removed ready-to-deploy Mark a PR as ready to deploy labels Feb 27, 2025

ocaisa approved these changes Feb 27, 2025

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ocaisa merged commit 994cc99 into EESSI:2023.06-software.eessi.io Feb 27, 2025
49 checks passed

bedroge deleted the sapphirerapids_eb494_2023b_batch1 branch February 27, 2025 08:14

This was referenced Apr 2, 2025

{2023.06}[2023b,grace] a couple of apps built with EB 4.9.4 #993

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Notes on building stack for NVIDIA Grace & Grace/Hopper #967

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trz42 mentioned this pull request Apr 20, 2025

Notes on building the stack for Fujitsu A64FX #1024

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{2023.06}[2023b,sapphirerapids] EB 4.9.4 easystack for 2023b #947

{2023.06}[2023b,sapphirerapids] EB 4.9.4 easystack for 2023b #947

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{2023.06}[2023b,sapphirerapids] EB 4.9.4 easystack for 2023b #947

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