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It should be like in JDT.
When I remove a file in the project explorer, even when I have opened it, it still stays in the FileView and asks whether or not to save the changes you made.
If you click save or hit CTRL + S like me every 20 seconds, this window pops up every time, which is very annoying because that file might be somewhere between your >60 opened tabs and the only thing to do is to close all tabs and then save.
File in FileView but non existing in project explorer