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55 changes: 54 additions & 1 deletion pymc/tests/test_logprob.py
Original file line number Diff line number Diff line change
Expand Up @@ -33,7 +33,13 @@
from pymc.aesaraf import floatX, walk_model
from pymc.distributions.continuous import HalfFlat, Normal, TruncatedNormal, Uniform
from pymc.distributions.discrete import Bernoulli
from pymc.distributions.logprob import ignore_logprob, joint_logpt, logcdf, logp
from pymc.distributions.logprob import (
_get_scaling,
ignore_logprob,
joint_logpt,
logcdf,
logp,
)
from pymc.model import Model, Potential
from pymc.tests.helpers import select_by_precision

Expand All @@ -43,6 +49,53 @@ def assert_no_rvs(var):
return var


def test_get_scaling():

assert _get_scaling(None, (2, 3), 2).eval() == 1
# ndim >=1 & ndim<1
assert _get_scaling(45, (2, 3), 1).eval() == 22.5
assert _get_scaling(45, (2, 3), 0).eval() == 45

# list or tuple tests
# total_size contains other than Ellipsis, None and Int
with pytest.raises(TypeError, match="Unrecognized `total_size` type"):
_get_scaling([2, 4, 5, 9, 11.5], (2, 3), 2)
# check with Ellipsis
with pytest.raises(ValueError, match="Double Ellipsis in `total_size` is restricted"):
_get_scaling([1, 2, 5, Ellipsis, Ellipsis], (2, 3), 2)
with pytest.raises(
ValueError,
match="Length of `total_size` is too big, number of scalings is bigger that ndim",
):
_get_scaling([1, 2, 5, Ellipsis], (2, 3), 2)

assert _get_scaling([Ellipsis], (2, 3), 2).eval() == 1

assert _get_scaling([4, 5, 9, Ellipsis, 32, 12], (2, 3, 2), 5).eval() == 960
assert _get_scaling([4, 5, 9, Ellipsis], (2, 3, 2), 5).eval() == 15
# total_size with no Ellipsis (end = [ ])
with pytest.raises(
ValueError,
match="Length of `total_size` is too big, number of scalings is bigger that ndim",
):
_get_scaling([1, 2, 5], (2, 3), 2)

assert _get_scaling([], (2, 3), 2).eval() == 1
assert _get_scaling((), (2, 3), 2).eval() == 1
# total_size invalid type
with pytest.raises(
TypeError,
match="Unrecognized `total_size` type, expected int or list of ints, got {1, 2, 5}",
):
_get_scaling({1, 2, 5}, (2, 3), 2)

# test with rvar from model graph
with Model() as m2:
rv_var = Uniform("a", 0.0, 1.0)
total_size = []
assert _get_scaling(total_size, shape=rv_var.shape, ndim=rv_var.ndim).eval() == 1.0


def test_joint_logpt_basic():
"""Make sure we can compute a log-likelihood for a hierarchical model with transforms."""

Expand Down