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Ev_simple_fasta_header #2

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bfa260e
feat: add example data for hmpv, rsv-a and rsv-b
anna-parker May 9, 2025
f835d95
fix
anna-parker May 9, 2025
e6da1ff
feat: add enteroviruses with no assignment in fasta header
anna-parker Aug 12, 2025
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171 changes: 171 additions & 0 deletions example_files/EVs_metadata_example.tsv
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Original file line number Diff line number Diff line change
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id geoLocCountry sampleCollectionDate authors authorAffiliations hostNameScientific collectionDevice collectionMethod cultureId depthOfCoverage geoLocAdmin1 geoLocAdmin2 sampleReceivedDate sequencingDate sequencingInstrument sequencingProtocol specimenCollectorSampleId versionComment
AB204852.1 Australia 2009-10-02 Author, Name Research Institute Sydney
EU376004.1 Canada 2024-11-23 Author, Name Research Institute Calgary
GQ231928.1 France 2003-11-05 Author, Name Research Institute Lyon
PP548269.1 Spain 2004-01-29 Author, Name Research Institute Barcelona
PP548251.1 Italy 2011-01-23 Author, Name Research Institute Palermo
PP548261.1 Germany 2012-06-10 Author, Name Research Institute Hamburg
MH716308.1 Spain 2000-09-22 Author, Name Research Institute Bilbao
MH716342.1 France 2004-02-11 Author, Name Research Institute Nice
MH716297.1 Germany 2019-12-30 Author, Name Research Institute Frankfurt
KJ686133.1 France 2007-03-15 Author, Name Research Institute Paris
MG756723.1 Canada 2013-10-15 Author, Name Research Institute Calgary
JX111890.1 Spain 2003-04-07 Author, Name Research Institute Barcelona
JN544418.1 Canada 2012-01-25 Author, Name Research Institute Ottawa
KF312457.1 Australia 2020-03-05 Author, Name Research Institute Sydney
MG976582.1 Japan 2008-02-22 Author, Name Research Institute Osaka
DQ133458.1 Canada 2009-06-29 Author, Name Research Institute Ottawa
FJ357373.1 Japan 2000-01-02 Author, Name Research Institute Yokohama
LC506516.1 Spain 2017-07-15 Author, Name Research Institute Barcelona
ON502200.1 Spain 2007-11-14 Author, Name Research Institute Bilbao
ON502179.1 USA 2009-12-18 Author, Name Research Institute Chicago
ON502241.1 Canada 2012-02-19 Author, Name Research Institute Toronto
PQ284496.1 Japan 2017-12-04 Author, Name Research Institute Tokyo
OQ091597.1 Brazil 2000-08-29 Author, Name Research Institute Fortaleza
PQ284500.1 Canada 2017-08-25 Author, Name Research Institute Vancouver
KC436270.1 Canada 2014-05-09 Author, Name Research Institute Montreal
MT360986.1 Canada 2002-03-11 Author, Name Research Institute Vancouver
KF974780.1 France 2022-01-27 Author, Name Research Institute Lyon
MF662684.1 Italy 2004-06-30 Author, Name Research Institute Naples
HQ424435.2 Italy 2014-05-24 Author, Name Research Institute Milan
JQ804832.1 Canada 2024-09-27 Author, Name Research Institute Montreal
OQ091582.1 Spain 2019-07-21 Author, Name Research Institute Barcelona
PQ284489.1 Australia 2014-03-09 Author, Name Research Institute Brisbane
OQ091604.1 Germany 2010-12-26 Author, Name Research Institute Berlin
MH716347.1 Germany 2008-02-08 Author, Name Research Institute Berlin
KU641502.1 Spain 2024-03-23 Author, Name Research Institute Seville
OQ355769.1 USA 2016-01-15 Author, Name Research Institute Los Angeles
LC375765.1 Germany 2024-05-10 Author, Name Research Institute Berlin
MT188611.1 Japan 2008-01-16 Author, Name Research Institute Kyoto
MH716358.1 Brazil 2005-08-04 Author, Name Research Institute São Paulo
MH716337.1 Brazil 2021-09-27 Author, Name Research Institute Brasília
KX372330.1 Australia 2005-03-25 Author, Name Research Institute Perth
MH511201.1 Australia 2007-08-23 Author, Name Research Institute Melbourne
MH511187.1 Japan 2017-06-02 Author, Name Research Institute Sapporo
MH511206.1 Italy 2020-05-01 Author, Name Research Institute Turin
LC506514.1 Spain 2001-11-05 Author, Name Research Institute Barcelona
LC626884.1 Spain 2021-11-04 Author, Name Research Institute Barcelona
LC375766.1 Japan 2022-04-27 Author, Name Research Institute Kyoto
LR027542.1 USA 2006-04-30 Author, Name Research Institute Phoenix
MN053430.1 Japan 2016-07-07 Author, Name Research Institute Kyoto
MG208882.1 Germany 2020-03-19 Author, Name Research Institute Berlin
MN053432.1 Spain 2002-10-18 Author, Name Research Institute Barcelona
KC436268.1 Italy 2001-08-29 Author, Name Research Institute Milan
AB575942.1 USA 2000-09-08 Author, Name Research Institute Houston
EU753407.2 Australia 2001-03-15 Author, Name Research Institute Adelaide
HQ423142.1 Brazil 2024-12-04 Author, Name Research Institute Brasília
GQ994992.1 Italy 2015-07-26 Author, Name Research Institute Palermo
HQ998852.1 Japan 2013-11-19 Author, Name Research Institute Yokohama
FJ357375.1 Germany 2010-10-25 Author, Name Research Institute Hamburg
LC375764.1 France 2025-06-26 Author, Name Research Institute Lyon
ON502280.1 Japan 2020-05-16 Author, Name Research Institute Osaka
ON502317.1 Italy 2015-05-05 Author, Name Research Institute Rome
ON502366.1 Spain 2006-03-09 Author, Name Research Institute Barcelona
KF974791.1 Canada 2004-07-25 Author, Name Research Institute Calgary
KX372315.1 Spain 2019-11-26 Author, Name Research Institute Barcelona
KJ686159.1 Spain 2020-01-15 Author, Name Research Institute Seville
HQ647172.1 Brazil 2010-04-14 Author, Name Research Institute Rio de Janeiro
FJ357379.1 Australia 2017-07-16 Author, Name Research Institute Brisbane
FJ357380.1 Germany 2015-04-24 Author, Name Research Institute Berlin
AB575927.1 Australia 2017-08-06 Author, Name Research Institute Adelaide
FJ357377.1 USA 2018-03-31 Author, Name Research Institute Chicago
AB575939.1 Brazil 2018-11-05 Author, Name Research Institute Fortaleza
HQ189392.1 Spain 2020-02-26 Author, Name Research Institute Barcelona
AB575918.1 Australia 2025-01-10 Author, Name Research Institute Sydney
AB575937.1 USA 2013-02-14 Author, Name Research Institute Phoenix
FJ357376.1 USA 2012-02-13 Author, Name Research Institute Chicago
JQ742001.1 USA 2021-04-03 Author, Name Research Institute Chicago
MW473684.1 USA 2003-11-25 Author, Name Research Institute Los Angeles
OQ842403.1 Canada 2004-02-20 Author, Name Research Institute Montreal
PP858876.1 Canada 2010-03-11 Author, Name Research Institute Montreal
MW354736.1 Germany 2001-11-28 Author, Name Research Institute Cologne
MG756703.1 USA 2017-03-25 Author, Name Research Institute Phoenix
MG756696.1 Spain 2010-10-05 Author, Name Research Institute Valencia
MG756698.1 Italy 2019-02-28 Author, Name Research Institute Milan
JX678885.1 Canada 2020-12-13 Author, Name Research Institute Toronto
JX678886.1 Spain 2017-07-23 Author, Name Research Institute Bilbao
LC626892.1 France 2017-01-24 Author, Name Research Institute Marseille
PP585431.1 Spain 2001-10-03 Author, Name Research Institute Valencia
ON646273.1 Italy 2018-07-02 Author, Name Research Institute Milan
PP585436.1 France 2023-12-06 Author, Name Research Institute Nice
PQ612464.1 Spain 2013-08-18 Author, Name Research Institute Barcelona
PP858877.1 Brazil 2014-02-06 Author, Name Research Institute Fortaleza
MG432108.1 Australia 2015-06-21 Author, Name Research Institute Adelaide
AB575912.1 Canada 2013-02-14 Author, Name Research Institute Toronto
AB575911.1 USA 2013-05-05 Author, Name Research Institute Houston
AB575916.1 USA 2006-01-31 Author, Name Research Institute New York
AB575917.1 Japan 2000-09-17 Author, Name Research Institute Osaka
AB575936.1 USA 2002-08-25 Author, Name Research Institute Houston
AB575935.1 Spain 2004-10-04 Author, Name Research Institute Barcelona
AB575914.1 Germany 2019-09-04 Author, Name Research Institute Cologne
AB575913.1 Italy 2016-03-27 Author, Name Research Institute Palermo
AB575915.1 Italy 2003-05-24 Author, Name Research Institute Turin
AB575923.1 Japan 2022-02-28 Author, Name Research Institute Osaka
MK419078.1 Spain 2009-05-24 Author, Name Research Institute Barcelona
OQ126967.1 Australia 2004-01-14 Author, Name Research Institute Adelaide
PQ612573.1 Italy 2023-11-13 Author, Name Research Institute Naples
PQ596456.1 Australia 2007-03-15 Author, Name Research Institute Sydney
MN240498.1 Germany 2021-04-04 Author, Name Research Institute Berlin
KU844178.1 Spain 2023-05-18 Author, Name Research Institute Barcelona
EF107098.1 Spain 2018-01-21 Author, Name Research Institute Barcelona
PP474864.1 Brazil 2025-06-12 Author, Name Research Institute Salvador
KX433165.1 Germany 2000-10-24 Author, Name Research Institute Cologne
OR230420.1 USA 2013-08-05 Author, Name Research Institute New York
MN259112.1 Brazil 2004-02-07 Author, Name Research Institute Fortaleza
KX255399.1 Italy 2021-05-11 Author, Name Research Institute Naples
KP745762.1 Japan 2001-07-09 Author, Name Research Institute Yokohama
KX255366.1 Canada 2001-09-16 Author, Name Research Institute Calgary
MH330334.1 France 2009-12-10 Author, Name Research Institute Nice
OK085461.1 Australia 2011-02-20 Author, Name Research Institute Sydney
LC629437.1 France 2013-03-13 Author, Name Research Institute Lyon
MN240496.1 Spain 2004-01-01 Author, Name Research Institute Barcelona
KX261811.1 Spain 2011-08-03 Author, Name Research Institute Barcelona
MN240491.1 France 2009-07-01 Author, Name Research Institute Lyon
KP455260.1 Spain 2023-04-03 Author, Name Research Institute Barcelona
MN240510.1 France 2009-09-01 Author, Name Research Institute Paris
LC107897.1 USA 2023-11-08 Author, Name Research Institute Chicago
KX255405.1 Italy 2021-09-20 Author, Name Research Institute Palermo
KP455257.1 Brazil 2007-06-04 Author, Name Research Institute Rio de Janeiro
KP455289.1 Spain 2004-08-01 Author, Name Research Institute Barcelona
KP455261.1 Spain 2018-06-16 Author, Name Research Institute Barcelona
KP455262.1 Australia 2015-05-19 Author, Name Research Institute Perth
KP455263.1 Italy 2000-01-29 Author, Name Research Institute Naples
LT617111.1 Brazil 2023-09-08 Author, Name Research Institute Brasília
LT617117.1 Australia 2007-02-11 Author, Name Research Institute Brisbane
PQ182728.1 Australia 2000-12-13 Author, Name Research Institute Adelaide
HQ423141.1 Germany 2007-11-19 Author, Name Research Institute Frankfurt
LT617096.1 Brazil 2022-03-11 Author, Name Research Institute Rio de Janeiro
MK989714.1 France 2001-01-06 Author, Name Research Institute Marseille
KF193623.1 Australia 2015-10-17 Author, Name Research Institute Sydney
KC695830.1 Brazil 2019-03-12 Author, Name Research Institute São Paulo
LT617106.1 Canada 2010-09-25 Author, Name Research Institute Ottawa
MT212032.1 Italy 2025-10-21 Author, Name Research Institute Palermo
PP585418.1 Australia 2004-10-26 Author, Name Research Institute Perth
MT212005.1 Germany 2021-03-13 Author, Name Research Institute Munich
OQ091684.1 Spain 2005-04-30 Author, Name Research Institute Madrid
KY792578.1 Italy 2021-10-30 Author, Name Research Institute Turin
OP562188.1 Canada 2015-12-10 Author, Name Research Institute Montreal
JQ746670.1 Japan 2006-09-03 Author, Name Research Institute Kyoto
JQ746675.1 Spain 2008-07-22 Author, Name Research Institute Barcelona
LT617092.1 France 2023-07-14 Author, Name Research Institute Lyon
OP562177.1 USA 2015-04-08 Author, Name Research Institute Los Angeles
JQ746676.1 Australia 2002-12-07 Author, Name Research Institute Melbourne
JQ746666.1 Australia 2024-12-14 Author, Name Research Institute Sydney
OP562173.1 Spain 2022-08-26 Author, Name Research Institute Seville
MF678332.1 Canada 2002-07-27 Author, Name Research Institute Calgary
OP562180.1 Australia 2006-04-10 Author, Name Research Institute Melbourne
OM417120.1 Canada 2023-10-04 Author, Name Research Institute Vancouver
OQ091661.1 Canada 2005-03-13 Author, Name Research Institute Montreal
PQ182729.1 Brazil 2003-09-12 Author, Name Research Institute Salvador
PV613772.1 France 2022-10-12 Author, Name Research Institute Marseille
JQ746665.1 Brazil 2024-07-18 Author, Name Research Institute Salvador
PP078930.1 France 2001-05-22 Author, Name Research Institute Lyon
PP078969.1 Australia 2016-06-08 Author, Name Research Institute Perth
OQ091512.1 Italy 2006-10-30 Author, Name Research Institute Naples
PP078995.1 Japan 2001-02-04 Author, Name Research Institute Tokyo
PP078947.1 Spain 2013-07-26 Author, Name Research Institute Barcelona
OQ091507.1 USA 2005-02-14 Author, Name Research Institute Chicago
OR095129.1 USA 2008-09-22 Author, Name Research Institute Los Angeles
MH144597.1 USA 2023-04-26 Author, Name Research Institute Phoenix
KT588920.1 Canada 2014-10-19 Author, Name Research Institute Montreal
MW929300.1 Australia 2016-07-15 Author, Name Research Institute Adelaide
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