Curl /_cat/indices causes null pointer exception

[mdmarek]

Elasticsearch version

curl -s localhost:9200/
{
  "name" : "es-c2-m1",
  "cluster_name" : "es-c2",
  "cluster_uuid" : "zc5Ak5LoRRy_zfaC39JTFA",
  "version" : {
    "number" : "5.5.2",
    "build_hash" : "b2f0c09",
    "build_date" : "2017-08-14T12:33:14.154Z",
    "build_snapshot" : false,
    "lucene_version" : "6.6.0"
  },
  "tagline" : "You Know, for Search"
}

Plugins installed: []

      "plugins" : [
        {
          "name" : "repository-gcs",
          "version" : "5.5.2",
          "description" : "The GCS repository plugin adds Google Cloud Storage support for repositories.",
          "classname" : "org.elasticsearch.repositories.gcs.GoogleCloudStoragePlugin",
          "has_native_controller" : false
        }
      ],

JVM version (java -version):

java -version
java version "1.8.0_144"
Java(TM) SE Runtime Environment (build 1.8.0_144-b01)
Java HotSpot(TM) 64-Bit Server VM (build 25.144-b01, mixed mode)

OS version

uname -a
Linux es-c2-m1 4.9.0-3-amd64 #1 SMP Debian 4.9.30-2+deb9u3 (2017-08-06) x86_64 GNU/Linux

Description of the problem including expected versus actual behavior:
Request indices via a curl, like so:

curl localhost:9200/_cat/indices

The expected result is a table of indices in the cluster, but instead a null pointer exception is returned:

curl localhost:9200/_cat/indices
{"error":{"root_cause":[{"type":"null_pointer_exception","reason":null}],"type":"null_pointer_exception","reason":null},"status":500}

Steps to reproduce:

1. ssh into any node in the cluster, master or data node
2. run command curl localhost:9200/_cat/indices

Provide logs (if relevant)
The following stack trace shows up in the logs right after the curl command is issued:

[2017-10-18T22:52:40,381][DEBUG][o.e.a.a.i.s.TransportIndicesStatsAction] [es-c2-m1] failed to execute [indices:monitor/stats] on node [6QkTt8qWSiKU1sZSTDa9dg]
org.elasticsearch.transport.RemoteTransportException: [es-c2-4][10.240.0.234:9300][indices:monitor/stats[n]]
Caused by: java.lang.IllegalStateException: Negative longs unsupported, use writeLong or writeZLong for negative numbers [-4134408331751]
	at org.elasticsearch.common.io.stream.StreamOutput.writeVLong(StreamOutput.java:219) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.index.search.stats.SearchStats$Stats.writeTo(SearchStats.java:211) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.index.search.stats.SearchStats.writeTo(SearchStats.java:353) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.common.io.stream.StreamOutput.writeOptionalStreamable(StreamOutput.java:723) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.action.admin.indices.stats.CommonStats.writeTo(CommonStats.java:255) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.action.admin.indices.stats.ShardStats.writeTo(ShardStats.java:102) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.common.io.stream.StreamOutput.writeOptionalStreamable(StreamOutput.java:723) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.action.support.broadcast.node.TransportBroadcastByNodeAction$NodeResponse.writeTo(TransportBroadcastByNodeAction.java:574) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.TcpTransport.buildMessage(TcpTransport.java:1235) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.TcpTransport.sendResponse(TcpTransport.java:1184) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.TcpTransport.sendResponse(TcpTransport.java:1165) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.TcpTransportChannel.sendResponse(TcpTransportChannel.java:67) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.TcpTransportChannel.sendResponse(TcpTransportChannel.java:61) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.DelegatingTransportChannel.sendResponse(DelegatingTransportChannel.java:60) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.RequestHandlerRegistry$TransportChannelWrapper.sendResponse(RequestHandlerRegistry.java:111) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.action.support.broadcast.node.TransportBroadcastByNodeAction$BroadcastByNodeTransportRequestHandler.messageReceived(TransportBroadcastByNodeAction.java:425) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.action.support.broadcast.node.TransportBroadcastByNodeAction$BroadcastByNodeTransportRequestHandler.messageReceived(TransportBroadcastByNodeAction.java:399) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.TransportRequestHandler.messageReceived(TransportRequestHandler.java:33) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.RequestHandlerRegistry.processMessageReceived(RequestHandlerRegistry.java:69) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.TcpTransport$RequestHandler.doRun(TcpTransport.java:1544) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.common.util.concurrent.ThreadContext$ContextPreservingAbstractRunnable.doRun(ThreadContext.java:638) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.common.util.concurrent.AbstractRunnable.run(AbstractRunnable.java:37) ~[elasticsearch-5.5.2.jar:5.5.2]
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) ~[?:1.8.0_144]
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) ~[?:1.8.0_144]
	at java.lang.Thread.run(Thread.java:748) [?:1.8.0_144]
[2017-10-18T22:52:40,383][WARN ][r.suppressed             ] path: /_cat/indices, params: {format=json}
java.lang.NullPointerException: null
	at org.elasticsearch.rest.action.cat.RestIndicesAction.buildTable(RestIndicesAction.java:368) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.rest.action.cat.RestIndicesAction$1$1$1.buildResponse(RestIndicesAction.java:116) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.rest.action.cat.RestIndicesAction$1$1$1.buildResponse(RestIndicesAction.java:113) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.rest.action.RestResponseListener.processResponse(RestResponseListener.java:37) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.rest.action.RestActionListener.onResponse(RestActionListener.java:47) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.action.support.TransportAction$1.onResponse(TransportAction.java:88) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.action.support.TransportAction$1.onResponse(TransportAction.java:84) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.action.support.broadcast.node.TransportBroadcastByNodeAction$AsyncAction.onCompletion(TransportBroadcastByNodeAction.java:391) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.action.support.broadcast.node.TransportBroadcastByNodeAction$AsyncAction.onNodeFailure(TransportBroadcastByNodeAction.java:376) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.action.support.broadcast.node.TransportBroadcastByNodeAction$AsyncAction$1.handleException(TransportBroadcastByNodeAction.java:335) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.TransportService$ContextRestoreResponseHandler.handleException(TransportService.java:1067) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.TcpTransport.lambda$handleException$16(TcpTransport.java:1467) ~[elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.common.util.concurrent.EsExecutors$1.execute(EsExecutors.java:110) [elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.TcpTransport.handleException(TcpTransport.java:1465) [elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.TcpTransport.handlerResponseError(TcpTransport.java:1457) [elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.TcpTransport.messageReceived(TcpTransport.java:1401) [elasticsearch-5.5.2.jar:5.5.2]
	at org.elasticsearch.transport.netty4.Netty4MessageChannelHandler.channelRead(Netty4MessageChannelHandler.java:74) [transport-netty4-5.5.2.jar:5.5.2]
	at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:362) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:348) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:340) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.handler.codec.ByteToMessageDecoder.fireChannelRead(ByteToMessageDecoder.java:310) [netty-codec-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.handler.codec.ByteToMessageDecoder.fireChannelRead(ByteToMessageDecoder.java:297) [netty-codec-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.handler.codec.ByteToMessageDecoder.callDecode(ByteToMessageDecoder.java:413) [netty-codec-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.handler.codec.ByteToMessageDecoder.channelRead(ByteToMessageDecoder.java:265) [netty-codec-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:362) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:348) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:340) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.DefaultChannelPipeline$HeadContext.channelRead(DefaultChannelPipeline.java:1334) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:362) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:348) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:926) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:134) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:644) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.nio.NioEventLoop.processSelectedKeysPlain(NioEventLoop.java:544) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:498) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:458) [netty-transport-4.1.11.Final.jar:4.1.11.Final]
	at io.netty.util.concurrent.SingleThreadEventExecutor$5.run(SingleThreadEventExecutor.java:858) [netty-common-4.1.11.Final.jar:4.1.11.Final]
	at java.lang.Thread.run(Thread.java:748) [?:1.8.0_144]

[tvernum]

@mdmarek What was the status of your cluster when this was happening?

We recently fixed (#26953) an issue (#26942) where a NPE would occur if a primary shard was missing (and the cluster was red).

[mdmarek]

@tvernum Thank you for responding. I saw those other issues, which is why I posted this one. The version of Elasticsearch we are using, 5.5.2, seems like it should be covered by those fixes.

In light of that, I though that this might be a regression, and the issue is not actually fixed.

To answer your question, the cluster is in green, and was in green when I ran those commands. I just ran it again, and get the same null pointer exception, here is the sequence of commands:

es-c2-m1:~$ curl -s 'localhost:9200/_cluster/health?pretty'
{
  "cluster_name" : "es-c2",
  "status" : "green",
  "timed_out" : false,
  "number_of_nodes" : 18,
  "number_of_data_nodes" : 15,
  "active_primary_shards" : 500,
  "active_shards" : 1000,
  "relocating_shards" : 0,
  "initializing_shards" : 0,
  "unassigned_shards" : 0,
  "delayed_unassigned_shards" : 0,
  "number_of_pending_tasks" : 0,
  "number_of_in_flight_fetch" : 0,
  "task_max_waiting_in_queue_millis" : 0,
  "active_shards_percent_as_number" : 100.0
}

es-c2-m1:~$ curl -s 'localhost:9200/_cat/indices?pretty'
{
  "error" : {
    "root_cause" : [
      {
        "type" : "null_pointer_exception",
        "reason" : null
      }
    ],
    "type" : "null_pointer_exception",
    "reason" : null
  },
  "status" : 500
}

This is an active cluster, so I can reproduce this issue at will. We are calling that path to fill a status page, unfortunately we just get the NPE.

Any ideas?

[pickypg]

@mdmarek

That PR was merged only into 5.6.4, which is unreleased. It is happening because of this line:

elasticsearch/core/src/main/java/org/elasticsearch/index/search/stats/SearchStats.java

Line 211 in b2f0c09

out.writeVLong(scrollTimeInMillis);

For some reason the scrollTimeInMillis is negative for at least one index for some reason. Given that you have 500 primaries, I have no idea which index is at fault here (and it may be more than one), but are you able to execute

$ curl -s 'localhost:9200/_stats?pretty'

I would kind of be surprised if you can, but I am curious if there is something else at play.

[mdmarek]

@pickypg Oddly enough I can run that command, here is the sequence:

es-c2-m1:~$ curl -s 'localhost:9200/_stats?pretty' >/tmp/out.tmp
es-c2-m1:~$ head -20 /tmp/out.tmp
{
  "_shards" : {
    "total" : 1000,
    "successful" : 134,
    "failed" : 866,
    "failures" : [
      {
        "shard" : 1,
        "index" : "ents_4_content",
        "status" : "INTERNAL_SERVER_ERROR",
        "reason" : {
          "type" : "failed_node_exception",
          "reason" : "Failed node [pguZHKx-SYeYMKmchXBkRg]",
          "caused_by" : {
            "type" : "illegal_state_exception",
            "reason" : "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-7481122573017]"
          }
        }
      },
      {

[mdmarek]

@tvernum @pickypg Thank you for clarifying which version will contain the fix.

[jasontedor]

Can you share the output of GET /_stats/search?level=shards?

[mdmarek]

@jasontedor Here is the output of GET /_stats/search?level=shards

``` { "_shards": { "total": 1000, "successful": 134, "failed": 866, "failures": [ { "shard": 1, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [pguZHKx-SYeYMKmchXBkRg]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-7119592664645]" } } }, { "shard": 6, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [9EcwT69NTAeOzOmHF8gptw]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-7089754353819]" } } }, { "shard": 8, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [4lglZut5TjS2cNudPg45Sw]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-2919678814984]" } } }, { "shard": 4, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [6QkTt8qWSiKU1sZSTDa9dg]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-3145018936215]" } } }, { "shard": 6, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [uxPGcUtFSKW3vZH9cg3Cbw]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-3198465973812]" } } }, { "shard": 9, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [aSlKFokMSnaon-r64Z23lg]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-7083790164540]" } } }, { "shard": 5, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [Y8RvPwP0QVqtcDJ54lI21A]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-7206350567482]" } } }, { "shard": 9, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [sr4zNmGURbmNceloV9GyGw]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-7121368275320]" } } }, { "shard": 3, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [S4PCLAFDSJ2HOYtA3S_XwA]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-7033974871860]" } } }, { "shard": 3, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [On8stbaqQxuZftfR3_fZpg]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-7149733983654]" } } }, { "shard": 1, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [BZ_Egw_kTVuYG9Y_BAPnNw]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-7064001399089]" } } }, { "shard": 4, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [9-RQY3OdR7WSwr4gUAp3DQ]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-7017593270581]" } } }, { "shard": 7, "index": "ents_3_4_y", "status": "INTERNAL_SERVER_ERROR", "reason": { "type": "failed_node_exception", "reason": "Failed node [BLq015s9S3etcGOU_zgsZw]", "caused_by": { "type": "illegal_state_exception", "reason": "Negative longs unsupported, use writeLong or writeZLong for negative numbers [-7069575020223]" } } } ] }, "_all": { "primaries": { "search": { "open_contexts": 24961, "query_total": 22019227, "query_time_in_millis": 4164165371, "query_current": 0, "fetch_total": 9082805, "fetch_time_in_millis": 31758662, "fetch_current": 0, "scroll_total": 11971703, "scroll_time_in_millis": 6732998278166, "scroll_current": 24961, "suggest_total": 0, "suggest_time_in_millis": 0, "suggest_current": 0 } }, "total": { "search": { "open_contexts": 25097, "query_total": 31313815, "query_time_in_millis": 7734204280, "query_current": 1, "fetch_total": 9219369, "fetch_time_in_millis": 59449550, "fetch_current": 0, "scroll_total": 11979447, "scroll_time_in_millis": 6985543196357, "scroll_current": 25097, "suggest_total": 0, "suggest_time_in_millis": 0, "suggest_current": 0 } } }, "indices": { "ents_6_13_z": { "primaries": { "search": { "open_contexts": 0, "query_total": 70055, "query_time_in_millis": 18536431, "query_current": 0, "fetch_total": 8166, "fetch_time_in_millis": 917631, "fetch_current": 0, "scroll_total": 28, "scroll_time_in_millis": 387169423, "scroll_current": 0, "suggest_total": 0, "suggest_time_in_millis": 0, "suggest_current": 0 } }, "total": { "search": { "open_contexts": 0, "query_total": 70055, "query_time_in_millis": 18536431, "query_current": 0, "fetch_total": 8166, "fetch_time_in_millis": 917631, "fetch_current": 0, "scroll_total": 28, "scroll_time_in_millis": 387169423, "scroll_current": 0, "suggest_total": 0, "suggest_time_in_millis": 0, "suggest_current": 0 } }, "shards": { "2": [ { "routing": { "state": "STARTED", "primary": true, "node": "wVqtKh8TShW9SCkALv40ww", "relocating_node": 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[jasontedor]

Thanks for reporting, I see the issue. I will open a fix shortly.