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[SPARK-8890][SQL] Fallback on sorting when writing many dynamic partitions #8010
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| /* | ||
| * Licensed to the Apache Software Foundation (ASF) under one or more | ||
| * contributor license agreements. See the NOTICE file distributed with | ||
| * this work for additional information regarding copyright ownership. | ||
| * The ASF licenses this file to You under the Apache License, Version 2.0 | ||
| * (the "License"); you may not use this file except in compliance with | ||
| * the License. You may obtain a copy of the License at | ||
| * | ||
| * http://www.apache.org/licenses/LICENSE-2.0 | ||
| * | ||
| * Unless required by applicable law or agreed to in writing, software | ||
| * distributed under the License is distributed on an "AS IS" BASIS, | ||
| * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. | ||
| * See the License for the specific language governing permissions and | ||
| * limitations under the License. | ||
| */ | ||
|
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| package org.apache.spark.sql.execution.datasources | ||
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| import java.io.IOException | ||
| import java.util.{Date, UUID} | ||
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| import scala.collection.JavaConversions.asScalaIterator | ||
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| import org.apache.hadoop.fs.Path | ||
| import org.apache.hadoop.mapreduce._ | ||
| import org.apache.hadoop.mapreduce.lib.output.{FileOutputCommitter => MapReduceFileOutputCommitter, FileOutputFormat} | ||
| import org.apache.spark._ | ||
| import org.apache.spark.mapred.SparkHadoopMapRedUtil | ||
| import org.apache.spark.mapreduce.SparkHadoopMapReduceUtil | ||
| import org.apache.spark.sql._ | ||
| import org.apache.spark.sql.catalyst.analysis.UnresolvedAttribute | ||
| import org.apache.spark.sql.catalyst.expressions._ | ||
| import org.apache.spark.sql.catalyst.expressions.codegen.GenerateProjection | ||
| import org.apache.spark.sql.catalyst.plans.logical.{LogicalPlan, Project} | ||
| import org.apache.spark.sql.catalyst.{CatalystTypeConverters, InternalRow} | ||
| import org.apache.spark.sql.execution.{RunnableCommand, SQLExecution} | ||
| import org.apache.spark.sql.sources._ | ||
| import org.apache.spark.sql.types.StringType | ||
| import org.apache.spark.util.{Utils, SerializableConfiguration} | ||
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| /** | ||
| * Inserts the results of `query` in to a relation that extends [[InsertableRelation]]. | ||
| */ | ||
| private[sql] case class InsertIntoDataSource( | ||
| logicalRelation: LogicalRelation, | ||
| query: LogicalPlan, | ||
| overwrite: Boolean) | ||
| extends RunnableCommand { | ||
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| override def run(sqlContext: SQLContext): Seq[Row] = { | ||
| val relation = logicalRelation.relation.asInstanceOf[InsertableRelation] | ||
| val data = DataFrame(sqlContext, query) | ||
| // Apply the schema of the existing table to the new data. | ||
| val df = sqlContext.internalCreateDataFrame(data.queryExecution.toRdd, logicalRelation.schema) | ||
| relation.insert(df, overwrite) | ||
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| // Invalidate the cache. | ||
| sqlContext.cacheManager.invalidateCache(logicalRelation) | ||
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| Seq.empty[Row] | ||
| } | ||
| } | ||
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| @@ -0,0 +1,165 @@ | ||
| /* | ||
| * Licensed to the Apache Software Foundation (ASF) under one or more | ||
| * contributor license agreements. See the NOTICE file distributed with | ||
| * this work for additional information regarding copyright ownership. | ||
| * The ASF licenses this file to You under the Apache License, Version 2.0 | ||
| * (the "License"); you may not use this file except in compliance with | ||
| * the License. You may obtain a copy of the License at | ||
| * | ||
| * http://www.apache.org/licenses/LICENSE-2.0 | ||
| * | ||
| * Unless required by applicable law or agreed to in writing, software | ||
| * distributed under the License is distributed on an "AS IS" BASIS, | ||
| * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. | ||
| * See the License for the specific language governing permissions and | ||
| * limitations under the License. | ||
| */ | ||
|
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| package org.apache.spark.sql.execution.datasources | ||
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| import java.io.IOException | ||
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| import org.apache.hadoop.fs.Path | ||
| import org.apache.hadoop.mapreduce._ | ||
| import org.apache.hadoop.mapreduce.lib.output.FileOutputFormat | ||
| import org.apache.spark._ | ||
| import org.apache.spark.sql._ | ||
| import org.apache.spark.sql.catalyst.analysis.UnresolvedAttribute | ||
| import org.apache.spark.sql.catalyst.plans.logical.{LogicalPlan, Project} | ||
| import org.apache.spark.sql.catalyst.InternalRow | ||
| import org.apache.spark.sql.execution.{RunnableCommand, SQLExecution} | ||
| import org.apache.spark.sql.sources._ | ||
| import org.apache.spark.util.Utils | ||
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| /** | ||
| * A command for writing data to a [[HadoopFsRelation]]. Supports both overwriting and appending. | ||
| * Writing to dynamic partitions is also supported. Each [[InsertIntoHadoopFsRelation]] issues a | ||
| * single write job, and owns a UUID that identifies this job. Each concrete implementation of | ||
| * [[HadoopFsRelation]] should use this UUID together with task id to generate unique file path for | ||
| * each task output file. This UUID is passed to executor side via a property named | ||
| * `spark.sql.sources.writeJobUUID`. | ||
| * | ||
| * Different writer containers, [[DefaultWriterContainer]] and [[DynamicPartitionWriterContainer]] | ||
| * are used to write to normal tables and tables with dynamic partitions. | ||
| * | ||
| * Basic work flow of this command is: | ||
| * | ||
| * 1. Driver side setup, including output committer initialization and data source specific | ||
| * preparation work for the write job to be issued. | ||
| * 2. Issues a write job consists of one or more executor side tasks, each of which writes all | ||
| * rows within an RDD partition. | ||
| * 3. If no exception is thrown in a task, commits that task, otherwise aborts that task; If any | ||
| * exception is thrown during task commitment, also aborts that task. | ||
| * 4. If all tasks are committed, commit the job, otherwise aborts the job; If any exception is | ||
| * thrown during job commitment, also aborts the job. | ||
| */ | ||
| private[sql] case class InsertIntoHadoopFsRelation( | ||
| @transient relation: HadoopFsRelation, | ||
| @transient query: LogicalPlan, | ||
| mode: SaveMode) | ||
| extends RunnableCommand { | ||
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| override def run(sqlContext: SQLContext): Seq[Row] = { | ||
| require( | ||
| relation.paths.length == 1, | ||
| s"Cannot write to multiple destinations: ${relation.paths.mkString(",")}") | ||
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| val hadoopConf = sqlContext.sparkContext.hadoopConfiguration | ||
| val outputPath = new Path(relation.paths.head) | ||
| val fs = outputPath.getFileSystem(hadoopConf) | ||
| val qualifiedOutputPath = outputPath.makeQualified(fs.getUri, fs.getWorkingDirectory) | ||
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| val pathExists = fs.exists(qualifiedOutputPath) | ||
| val doInsertion = (mode, pathExists) match { | ||
| case (SaveMode.ErrorIfExists, true) => | ||
| throw new AnalysisException(s"path $qualifiedOutputPath already exists.") | ||
| case (SaveMode.Overwrite, true) => | ||
| Utils.tryOrIOException { | ||
| if (!fs.delete(qualifiedOutputPath, true /* recursively */)) { | ||
| throw new IOException(s"Unable to clear output " + | ||
| s"directory $qualifiedOutputPath prior to writing to it") | ||
| } | ||
| } | ||
| true | ||
| case (SaveMode.Append, _) | (SaveMode.Overwrite, _) | (SaveMode.ErrorIfExists, false) => | ||
| true | ||
| case (SaveMode.Ignore, exists) => | ||
| !exists | ||
| case (s, exists) => | ||
| throw new IllegalStateException(s"unsupported save mode $s ($exists)") | ||
| } | ||
| // If we are appending data to an existing dir. | ||
| val isAppend = pathExists && (mode == SaveMode.Append) | ||
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| if (doInsertion) { | ||
| val job = new Job(hadoopConf) | ||
| job.setOutputKeyClass(classOf[Void]) | ||
| job.setOutputValueClass(classOf[InternalRow]) | ||
| FileOutputFormat.setOutputPath(job, qualifiedOutputPath) | ||
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| // A partitioned relation schema's can be different from the input logicalPlan, since | ||
| // partition columns are all moved after data column. We Project to adjust the ordering. | ||
| // TODO: this belongs in the analyzer. | ||
| val project = Project( | ||
| relation.schema.map(field => UnresolvedAttribute.quoted(field.name)), query) | ||
| val queryExecution = DataFrame(sqlContext, project).queryExecution | ||
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| SQLExecution.withNewExecutionId(sqlContext, queryExecution) { | ||
| val df = sqlContext.internalCreateDataFrame(queryExecution.toRdd, relation.schema) | ||
| val partitionColumns = relation.partitionColumns.fieldNames | ||
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| // Some pre-flight checks. | ||
| require( | ||
| df.schema == relation.schema, | ||
| s"""DataFrame must have the same schema as the relation to which is inserted. | ||
| |DataFrame schema: ${df.schema} | ||
| |Relation schema: ${relation.schema} | ||
| """.stripMargin) | ||
|
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Nit: Indentation is off. |
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| val partitionColumnsInSpec = relation.partitionColumns.fieldNames | ||
|
Member
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Seems
Contributor
Author
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Hmm, thats possible. I just copied this from the earlier code and moved it to a better place. If you want to add an analysis test to make sure this error works and then can still remove this code that would be great! |
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| require( | ||
| partitionColumnsInSpec.sameElements(partitionColumns), | ||
| s"""Partition columns mismatch. | ||
| |Expected: ${partitionColumnsInSpec.mkString(", ")} | ||
| |Actual: ${partitionColumns.mkString(", ")} | ||
| """.stripMargin) | ||
|
Contributor
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Nit: Indentation off. |
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| val writerContainer = if (partitionColumns.isEmpty) { | ||
| new DefaultWriterContainer(relation, job, isAppend) | ||
| } else { | ||
| val output = df.queryExecution.executedPlan.output | ||
| val (partitionOutput, dataOutput) = | ||
| output.partition(a => partitionColumns.contains(a.name)) | ||
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| new DynamicPartitionWriterContainer( | ||
| relation, | ||
| job, | ||
| partitionOutput, | ||
| dataOutput, | ||
| output, | ||
| PartitioningUtils.DEFAULT_PARTITION_NAME, | ||
| sqlContext.conf.getConf(SQLConf.PARTITION_MAX_FILES), | ||
| isAppend) | ||
| } | ||
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| // This call shouldn't be put into the `try` block below because it only initializes and | ||
| // prepares the job, any exception thrown from here shouldn't cause abortJob() to be called. | ||
| writerContainer.driverSideSetup() | ||
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| try { | ||
| sqlContext.sparkContext.runJob(df.queryExecution.toRdd, writerContainer.writeRows _) | ||
| writerContainer.commitJob() | ||
| relation.refresh() | ||
| } catch { case cause: Throwable => | ||
| logError("Aborting job.", cause) | ||
| writerContainer.abortJob() | ||
| throw new SparkException("Job aborted.", cause) | ||
| } | ||
| } | ||
| } else { | ||
| logInfo("Skipping insertion into a relation that already exists.") | ||
| } | ||
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| Seq.empty[Row] | ||
| } | ||
| } | ||
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Looks like the
InsertIntoDataSourceis inconsistent withInsertIntoHadoopFsRelation.InsertIntoHadoopFsRelation, we do the insertion insideSQLExecution.withNewExecutionId, but here we don't.InsertIntoHadoopFsRelationdon't.Is this by intentional?
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The cache invalidation part is a known bug.
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@chenghao-intel is trying to fix this in #8023