Pancreon

Channelome profiling in PANC-1 cell line

Dependencies

Bash

• kerblam (>= 1.0.0-rc.1)
• x.FASTQ (>= 2.0.0)

R

• ggplot2 (>= 3.5.0)
• dplyr (>= 1.1.4)
• r4tcpl (>= 1.5.1)
• readABF (>= 1.0.2)
• RSQLite (>= 2.3.5)
• DBI (>= 1.2.3)

Run the analysis

kerblam data fetch
kerblam run make_geneset
kerblam run quality
kerblam run profiler
kerblam run currents