Pin pillow to make graphics tests work again. #3630
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* Bump version to 2.4.0rc0. * unpin mpl (#3468) * Merge pull request #3301 from bayliffe/fastpercentilemethod_mask_test Analysis percentile method - update applicability test for fast_percentile_method * Have Travis test with iris-grib, remove problem tests (#3469) * Have Travis test with iris-grib, remove problem tests * mock GribInternalError correctly * Update license headers * account for changes in handling of grib message defaults * Test against the latest version of python-eccodes * Moved irir-grib skip to iris.tests * Merge pull request #2608 from cpelley/PICKLEABLE_FORMATS TEST: Extends #2569 to unpickle * _regrid_area_weighted_array: Move axes creation over which weights are calculated to before loop (#3519) * Purge iris.experimental.regrid np<1.7 support (#3539) * Add NameConstraint with relaxed name loading (#3463) * _regrid_area_weighted_array: move indices variable nearer to use (#3564) * _regrid_area_weighted_array: Tweak variable order to near other use in code (#3571) * Fix problems with export and echo command. (#3577) * Pushdocs fix2 (#3580) * Revert to single-line command for doctr invocation. * Added script comment, partly to force Github respin. * Bracketed six.moves and __future__ imports. * Fixes required due to the release of iris-grib v0.15.0 (#3582) * Fix python-eccodes pin in travis (#3593) * PI-2472: Optimise the area weighted regridding routine (#3598) * PI-2472: Tweak area weighting regrid move xdim and ydim axes (#3594) * _regrid_area_weighted_array: Set axis order to y_dim, x_dim last dimensions * _regrid_area_weighted_array: Extra tests for axes ordering * PI-2472: Tweak area weighting regrid enforce xdim ydim (#3595) * _regrid_area_weighted_array: Set axis order to y_dim, x_dim last dimensions * _regrid_area_weighted_array: Extra tests for axes ordering * _regrid_area_weighted_array: Ensure x_dim and y_dim * PI-2472: Tweak area weighting regrid move averaging out of loop (#3596) * _regrid_area_weighted_array: Refactor weights and move averaging outside loop * Pin pillow to make graphics tests work again. (#3630) * PI-2472: Area weighted regridding (#3623) * The Area-weights routine is refactored into the "__prepare" and "__perform" structure, in-line with our other regridding methods. * The area-weights are now computed in the "__prepare", so are calculated once. * The information required for checking the regridding weights and target grid info are now cached on the "regridder" object. * This is inline with the general use already described in the documentation. * pep8 conformance. * pep8 compliance. * Allow some 'key=None' args in Geostationary creation. (#3628) LGTM * Allow some 'key=None' args in Geostationary creation. * Integration test loading netcdf geostationary without offset properties. * pep8 conformance. * pep8 conformance. * pep8 conformance. * test_NameConstraint get mock from iris.tests. * Remove use of super() in _constraints.py for Py2 compatibility. * Updated license headers. * Updated iris-grib reference in extensions.txt. * Py2 support for iris-grib in Travis. * Updates for auto docs for Iris 2.4 release. * What's new entry to unpinning mpl. * Edited Py2 support for iris-grib in Travis. * Renamed whatsnew contributions folder for v2.4. * Hacked tests.integration.test_grib2 to avoid import error from iris-grib version < 0.15. * Only test grib with python 3. * Compiled v2.4 whatsnew. Co-authored-by: Martin Yeo <[email protected]> Co-authored-by: Bill Little <[email protected]> Co-authored-by: stephenworsley <[email protected]> Co-authored-by: abooton <[email protected]> Co-authored-by: lbdreyer <[email protected]> Co-authored-by: Emma Hogan <[email protected]>
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* add lenient infra-structure * add metadata lenient __eq__ support * complete __eq__, combine and difference support * explicit inherited lenient_service + support equal convenience * fix attributes difference + lenient kwargs * make lenient public + minor tidy * rename MetadataManagerFactory to metadata_manager_factory * extend lenient_client decorator to support services registration * add lenient test coverage * purge qualname usage in metadata.py * support global enable for lenient services * support partial mapping metadata assignment * purge Lenient.__setattr__ from api * add BaseMetadata compare test coverage * metadata rationalisation * add BaseMetadata difference test coverage * added context manager ephemeral comment clarification * add BaseMetadata __ne__ test coverage * standardise lenient decorator closure names * add BaseMetadata equal test coverage * half dunder context * add AncillaryVariableMetadata test coverage * add additional AncillaryVariableMetadata test coverage * add CellMeasureMetadata test coverage * Clarify lenient_service operation + simplify code. * add CoordMetadata test coverage * add CubeMetadata test coverage * metadata tests use self.cls * fix typo * fix context manager ephemeral services * add logging * Pin pillow to make graphics tests work again. (#3630) * Fixed tests since Numpy 1.18 deprecation of non-int num arguments for linspace. (#3655) * Switched use of datetime.weekday() to datetime.dayofwk. (#3687) * New image hashes for mpl 3x2 (#3682) * New image hash for iris.test.test_plot.TestSymbols.test_cloud_cover with matplotlib 3.2.0. * Further images changes for mpl3x2. * Yet more updated image results. * fix sentinel uniqueness test failure * remove redundant cdm mapping test * difference returns None for no difference * protect Lenient and LENIENT private * privitise lenient framework and add API veneer * add explicit maths feature default * review actions * review actions * trexfeathers review actions * stephenworsley review actions Co-authored-by: Patrick Peglar <[email protected]> Co-authored-by: Martin Yeo <[email protected]>
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* add lenient infra-structure * add metadata lenient __eq__ support * complete __eq__, combine and difference support * explicit inherited lenient_service + support equal convenience * fix attributes difference + lenient kwargs * make lenient public + minor tidy * rename MetadataManagerFactory to metadata_manager_factory * extend lenient_client decorator to support services registration * add lenient test coverage * purge qualname usage in metadata.py * support global enable for lenient services * support partial mapping metadata assignment * purge Lenient.__setattr__ from api * add BaseMetadata compare test coverage * metadata rationalisation * add BaseMetadata difference test coverage * added context manager ephemeral comment clarification * add BaseMetadata __ne__ test coverage * standardise lenient decorator closure names * add BaseMetadata equal test coverage * half dunder context * add AncillaryVariableMetadata test coverage * add additional AncillaryVariableMetadata test coverage * add CellMeasureMetadata test coverage * Clarify lenient_service operation + simplify code. * add CoordMetadata test coverage * add CubeMetadata test coverage * metadata tests use self.cls * fix typo * fix context manager ephemeral services * add logging * Pin pillow to make graphics tests work again. (SciTools#3630) * Fixed tests since Numpy 1.18 deprecation of non-int num arguments for linspace. (SciTools#3655) * Switched use of datetime.weekday() to datetime.dayofwk. (SciTools#3687) * New image hashes for mpl 3x2 (SciTools#3682) * New image hash for iris.test.test_plot.TestSymbols.test_cloud_cover with matplotlib 3.2.0. * Further images changes for mpl3x2. * Yet more updated image results. * fix sentinel uniqueness test failure * remove redundant cdm mapping test * difference returns None for no difference * protect Lenient and LENIENT private * privitise lenient framework and add API veneer * add explicit maths feature default * review actions * review actions * trexfeathers review actions * stephenworsley review actions Co-authored-by: Patrick Peglar <[email protected]> Co-authored-by: Martin Yeo <[email protected]>
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* PI-3478: Common metadata API (#3583) * common metadata api * rationalise _cube_coord_common into common * move state into metadata * MetadataFactory test coverage * temporarily pin back iris-grib * test coverage for iris.common.metadata._BaseMeta * test coverage for iris.common.mixin.LimitedAttributeDict * remove temporary iris-grib pin * review actions * Update lib/iris/tests/unit/common/metadata/test_BaseMetadata.py Co-Authored-By: lbdreyer <[email protected]> * [FB] [PI-3478] Lenient metadata (#3739) * add lenient infra-structure * add metadata lenient __eq__ support * complete __eq__, combine and difference support * explicit inherited lenient_service + support equal convenience * fix attributes difference + lenient kwargs * make lenient public + minor tidy * rename MetadataManagerFactory to metadata_manager_factory * extend lenient_client decorator to support services registration * add lenient test coverage * purge qualname usage in metadata.py * support global enable for lenient services * support partial mapping metadata assignment * purge Lenient.__setattr__ from api * add BaseMetadata compare test coverage * metadata rationalisation * add BaseMetadata difference test coverage * added context manager ephemeral comment clarification * add BaseMetadata __ne__ test coverage * standardise lenient decorator closure names * add BaseMetadata equal test coverage * half dunder context * add AncillaryVariableMetadata test coverage * add additional AncillaryVariableMetadata test coverage * add CellMeasureMetadata test coverage * Clarify lenient_service operation + simplify code. * add CoordMetadata test coverage * add CubeMetadata test coverage * metadata tests use self.cls * fix typo * fix context manager ephemeral services * add logging * Pin pillow to make graphics tests work again. (#3630) * Fixed tests since Numpy 1.18 deprecation of non-int num arguments for linspace. (#3655) * Switched use of datetime.weekday() to datetime.dayofwk. (#3687) * New image hashes for mpl 3x2 (#3682) * New image hash for iris.test.test_plot.TestSymbols.test_cloud_cover with matplotlib 3.2.0. * Further images changes for mpl3x2. * Yet more updated image results. * fix sentinel uniqueness test failure * remove redundant cdm mapping test * difference returns None for no difference * protect Lenient and LENIENT private * privitise lenient framework and add API veneer * add explicit maths feature default * review actions * review actions * trexfeathers review actions * stephenworsley review actions Co-authored-by: Patrick Peglar <[email protected]> Co-authored-by: Martin Yeo <[email protected]> * [FB] [PI-3478] Lenient cube arithmetic (#3774) * initial cube arithmetic * support in-place cube resolve * fix non in-place broadcasting * remove temporary resolve scenario test * lenient/strict support for attributes dicts with numpy arrays * lenient/strict treatment of scalar coordinates * strict points/bounds matching * lenient/strict prepare local dim/aux/scalar coordinates * support extended broadcasting * always raise exception on points/bounds mismatch * ignore scalar points/bounds mismatches, lenient only * remove todos * tidy logger debugs * qualify src/tgt cube references in debug * Numpy rounding fix (#3758) ensure rounding is numpy like (maintains type) * avoid unittest.mock.sentinel copy issue * fast load np.int32 * fix cube maths doctest * fix iris.common.resolve logging configuration * fix prepare points/bounds + extra metadata cml * support mapping reversal based on free dims * var_name fix for lenient equality * add support for DimCoordMetadata * fix circular flag + support CoordMetadata and DimCoordMetadata exchange * fix circular issue for concatenate DimCoord->AuxCoord demotion * fix concatenate._CubeSignature sorted * minor tweaks * keep lenient_client private in maths * tidy maths * tidy iris.analysis.maths.IFunc * refactor IFunc test * polish in-place support * tidy metadata_resolve Co-authored-by: stephenworsley <[email protected]> * rebase master fix-up for cube arithmetic * add missing new dependency to readthedocs.yml requirements Co-authored-by: lbdreyer <[email protected]> Co-authored-by: Patrick Peglar <[email protected]> Co-authored-by: Martin Yeo <[email protected]> Co-authored-by: stephenworsley <[email protected]>
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Discovered in course of #3628 that graphics tests have broken.
Explained here : SciTools/test-iris-imagehash#28