{2023.06}[foss/2023a] BWA v0.7.17-20220923 #321

trz42 · 2024-04-14T11:14:20Z

Syncing NESSI with EESSI (PR 468).

SPDX license identifier: GPL-3.0-only

Missing installations:

1 out of 3 required modules missing:

* BWA/0.7.17.20220923-GCCcore-12.3.0 (BWA-0.7.17.20220923-GCCcore-12.3.0.eb)

nessi-bot · 2024-04-14T11:14:24Z

Instance AWS-MC-NESSI is configured to build:

arch x86_64/generic for repo nessi-2023.06-cl
arch x86_64/generic for repo nessi-2023.06-swl-deb10
arch x86_64/generic for repo nessi-2023.06-swl-deb11
arch x86_64/intel/skylake_avx512 for repo nessi-2023.06-cl
arch x86_64/intel/skylake_avx512 for repo nessi-2023.06-swl-deb10
arch x86_64/intel/skylake_avx512 for repo nessi-2023.06-swl-deb11
arch x86_64/amd/zen2 for repo nessi-2023.06-cl
arch x86_64/amd/zen2 for repo nessi-2023.06-swl-deb10
arch x86_64/amd/zen2 for repo nessi-2023.06-swl-deb11
arch aarch64/generic for repo nessi-2023.06-cl
arch aarch64/generic for repo nessi-2023.06-swl-deb10
arch aarch64/generic for repo nessi-2023.06-swl-deb11

nessi-bot · 2024-04-14T11:14:25Z

Instance eX3-NESSI is configured to build:

arch x86_64/amd/zen2 for repo nessi-2023.06-cl
arch x86_64/amd/zen2 for repo nessi-2023.06-swl-deb10
arch x86_64/amd/zen2 for repo nessi-2023.06-swl-deb11
arch aarch64/generic for repo nessi-2023.06-cl
arch aarch64/generic for repo nessi-2023.06-swl-deb10
arch aarch64/generic for repo nessi-2023.06-swl-deb11

nessi-bot · 2024-04-14T11:14:25Z

Instance Fram-NESSI is configured to build:

arch x86_64/generic for repo nessi-2023.06-cl
arch x86_64/generic for repo nessi-2023.06-swl-deb10
arch x86_64/generic for repo nessi-2023.06-swl-deb11
arch x86_64/intel/broadwell for repo nessi-2023.06-cl
arch x86_64/intel/broadwell for repo nessi-2023.06-swl-deb10
arch x86_64/intel/broadwell for repo nessi-2023.06-swl-deb11

nessi-bot · 2024-04-14T11:14:25Z

Instance Saga-NESSI is configured to build:

arch x86_64/intel/skylake_avx512 for repo nessi-2023.06-cl
arch x86_64/intel/skylake_avx512 for repo nessi-2023.06-swl-deb10
arch x86_64/intel/skylake_avx512 for repo nessi-2023.06-swl-deb11
arch x86_64/intel/broadwell for repo nessi-2023.06-cl
arch x86_64/intel/broadwell for repo nessi-2023.06-swl-deb10
arch x86_64/intel/broadwell for repo nessi-2023.06-swl-deb11
arch x86_64/generic for repo nessi-2023.06-cl
arch x86_64/generic for repo nessi-2023.06-swl-deb10
arch x86_64/generic for repo nessi-2023.06-swl-deb11

trz42 · 2024-04-14T11:14:33Z

bot: build inst:Fram-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell
bot: build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake
bot: build inst:eX3-NESSI repo:nessi-2023.06-swl-deb10 arch:aarch64/generic
bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2
bot: build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic

nessi-bot · 2024-04-14T11:14:36Z

Updates by the bot instance AWS-MC-NESSI (click for details)

received bot command build inst:Fram-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from trz42
- expanded format: build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from trz42
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3-NESSI repo:nessi-2023.06-swl-deb10 arch:aarch64/generic from trz42
- expanded format: build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
handling command build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted
handling command build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- submitted job 9411, for details & status see {2023.06}[foss/2023a] BWA v0.7.17-20220923 #321 (comment)
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- submitted job 9412, for details & status see {2023.06}[foss/2023a] BWA v0.7.17-20220923 #321 (comment)

nessi-bot · 2024-04-14T11:14:36Z

Updates by the bot instance eX3-NESSI (click for details)

received bot command build inst:Fram-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from trz42
- expanded format: build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from trz42
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3-NESSI repo:nessi-2023.06-swl-deb10 arch:aarch64/generic from trz42
- expanded format: build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
handling command build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted
handling command build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic resulted in:
- submitted job 169941, for details & status see {2023.06}[foss/2023a] BWA v0.7.17-20220923 #321 (comment)
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-04-14T11:14:36Z

Updates by the bot instance Saga-NESSI (click for details)

received bot command build inst:Fram-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from trz42
- expanded format: build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from trz42
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3-NESSI repo:nessi-2023.06-swl-deb10 arch:aarch64/generic from trz42
- expanded format: build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
handling command build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- submitted job 11166287, for details & status see {2023.06}[foss/2023a] BWA v0.7.17-20220923 #321 (comment)
handling command build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-04-14T11:14:36Z

Updates by the bot instance Fram-NESSI (click for details)

received bot command build inst:Fram-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from trz42
- expanded format: build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/skylake from trz42
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake
received bot command build inst:eX3-NESSI repo:nessi-2023.06-swl-deb10 arch:aarch64/generic from trz42
- expanded format: build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:zen2 from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2
received bot command build inst:AWS-MC-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/generic from trz42
- expanded format: build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic
handling command build instance:Fram-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- submitted job 5768371, for details & status see {2023.06}[foss/2023a] BWA v0.7.17-20220923 #321 (comment)
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/skylake resulted in:
- no jobs were submitted
handling command build instance:eX3-NESSI repository:nessi-2023.06-swl-deb10 architecture:aarch64/generic resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:zen2 resulted in:
- no jobs were submitted
handling command build instance:AWS-MC-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/generic resulted in:
- no jobs were submitted

nessi-bot · 2024-04-14T11:14:40Z

New job on instance Fram-NESSI for architecture x86_64-intel-broadwell for repository nessi-2023.06-swl-deb11 in job dir /cluster/projects/nn9992k/pilot.nessi.no/jobs/2024.04/pr_321/5768371

date	job status	comment
Apr 14 11:14:39 UTC 2024	submitted	job id `5768371` awaits release by job manager
Apr 14 11:15:31 UTC 2024	released	job awaits launch by Slurm scheduler
Apr 14 12:07:38 UTC 2024	finished	🤷 UNKNOWN (click triangle for details) Job results file `_bot_job5768371.result` does not exist in job directory, or parsing it failed. No artefacts were found/reported.
Apr 14 12:07:38 UTC 2024	test result	🤷 UNKNOWN (click triangle for details) Job test file `_bot_job5768371.test` does not exist in job directory, or parsing it failed.

nessi-bot · 2024-04-14T11:14:41Z

New job on instance eX3-NESSI for architecture aarch64-generic for repository nessi-2023.06-swl-deb10 in job dir /home/thomarob/pilot.nessi.no/jobs/2024.04/pr_321/169941

date	job status	comment
Apr 14 11:14:40 AM UTC 2024	submitted	job id `169941` awaits release by job manager
Apr 14 11:15:01 AM UTC 2024	released	job awaits launch by Slurm scheduler
Apr 14 11:16:03 AM UTC 2024	running	job `169941` is running
Apr 14 11:46:00 AM UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-169941.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-generic-1713093385.tar.gz` size: 0 MiB (417541 bytes) entries: 52 modules under 2023.06/software/linux/aarch64/generic/modules/all `BWA/0.7.17-20220923-GCCcore-12.3.0.lua` software under 2023.06/software/linux/aarch64/generic/software `BWA/0.7.17-20220923-GCCcore-12.3.0` other under 2023.06/software/linux/aarch64/generic no other files in tarball
Apr 14 11:46:00 AM UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-169941.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Apr 14 12:08:42 PM UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-generic-1713093385.tar.gz` to S3 bucket succeeded
Apr 14 12:10:58 PM UTC 2024	staged	tarball `eessi-2023.06-software-linux-aarch64-generic-1713093385.tar.gz` downloaded to Stratum-0
Apr 14 12:11:10 PM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/136 to approve ingest
Apr 14 12:13:54 PM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-aarch64-generic-1713093385.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/136
Apr 14 12:14:39 PM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-aarch64-generic-1713093385.tar.gz` successfully ingested at `2023.06/software/linux/aarch64/generic/`

nessi-bot · 2024-04-14T11:14:42Z

New job on instance AWS-MC-NESSI for architecture x86_64-amd-zen2 for repository nessi-2023.06-swl-deb11 in job dir /project/def-nessi/SHARED/jobs/2024.04/pr_321/9411

date	job status	comment
Apr 14 11:14:41 UTC 2024	submitted	job id `9411` awaits release by job manager
Apr 14 11:14:55 UTC 2024	released	job awaits launch by Slurm scheduler
Apr 14 11:18:59 UTC 2024	running	job `9411` is running
Apr 14 11:40:08 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-9411.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-amd-zen2-1713093856.tar.gz` size: 0 MiB (446927 bytes) entries: 52 modules under 2023.06/software/linux/x86_64/amd/zen2/modules/all `BWA/0.7.17-20220923-GCCcore-12.3.0.lua` software under 2023.06/software/linux/x86_64/amd/zen2/software `BWA/0.7.17-20220923-GCCcore-12.3.0` other under 2023.06/software/linux/x86_64/amd/zen2 no other files in tarball
Apr 14 11:40:08 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-9411.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Apr 14 12:08:46 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-amd-zen2-1713093856.tar.gz` to S3 bucket succeeded
Apr 14 12:11:00 PM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-amd-zen2-1713093856.tar.gz` downloaded to Stratum-0
Apr 14 12:11:13 PM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/137 to approve ingest
Apr 14 12:13:57 PM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-x86_64-amd-zen2-1713093856.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/137
Apr 14 12:15:08 PM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-x86_64-amd-zen2-1713093856.tar.gz` successfully ingested at `2023.06/software/linux/x86_64/amd/zen2/`

nessi-bot · 2024-04-14T11:14:45Z

New job on instance AWS-MC-NESSI for architecture x86_64-generic for repository nessi-2023.06-swl-deb11 in job dir /project/def-nessi/SHARED/jobs/2024.04/pr_321/9412

date	job status	comment
Apr 14 11:14:44 UTC 2024	submitted	job id `9412` awaits release by job manager
Apr 14 11:14:56 UTC 2024	released	job awaits launch by Slurm scheduler
Apr 14 11:19:00 UTC 2024	running	job `9412` is running
Apr 14 11:42:14 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-9412.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-generic-1713093806.tar.gz` size: 0 MiB (425133 bytes) entries: 52 modules under 2023.06/software/linux/x86_64/generic/modules/all `BWA/0.7.17-20220923-GCCcore-12.3.0.lua` software under 2023.06/software/linux/x86_64/generic/software `BWA/0.7.17-20220923-GCCcore-12.3.0` other under 2023.06/software/linux/x86_64/generic no other files in tarball
Apr 14 11:42:14 UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-9412.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Apr 14 12:09:06 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-generic-1713093806.tar.gz` to S3 bucket succeeded
Apr 14 12:11:02 PM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-generic-1713093806.tar.gz` downloaded to Stratum-0
Apr 14 12:11:15 PM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/138 to approve ingest
Apr 14 12:13:59 PM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-x86_64-generic-1713093806.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/138
Apr 14 12:15:36 PM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-x86_64-generic-1713093806.tar.gz` successfully ingested at `2023.06/software/linux/x86_64/generic/`

nessi-bot · 2024-04-14T11:14:52Z

New job on instance Saga-NESSI for architecture x86_64-intel-skylake_avx512 for repository nessi-2023.06-swl-deb11 in job dir /cluster/projects/nn9992k/pilot.nessi.no/jobs/2024.04/pr_321/11166287

date	job status	comment
Apr 14 11:14:51 AM UTC 2024	submitted	job id `11166287` awaits release by job manager
Apr 14 11:15:32 AM UTC 2024	released	job awaits launch by Slurm scheduler
Apr 14 11:16:34 AM UTC 2024	running	job `11166287` is running
Apr 14 11:41:52 AM UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-11166287.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1713093469.tar.gz` size: 0 MiB (437245 bytes) entries: 52 modules under 2023.06/software/linux/x86_64/intel/skylake_avx512/modules/all `BWA/0.7.17-20220923-GCCcore-12.3.0.lua` software under 2023.06/software/linux/x86_64/intel/skylake_avx512/software `BWA/0.7.17-20220923-GCCcore-12.3.0` other under 2023.06/software/linux/x86_64/intel/skylake_avx512 no other files in tarball
Apr 14 11:41:52 AM UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-11166287.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Apr 14 12:08:52 PM UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1713093469.tar.gz` to S3 bucket succeeded
Apr 14 12:11:06 PM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1713093469.tar.gz` downloaded to Stratum-0
Apr 14 12:11:20 PM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/140 to approve ingest
Apr 14 12:14:04 PM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1713093469.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/140
Apr 14 12:16:44 PM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-x86_64-intel-skylake_avx512-1713093469.tar.gz` successfully ingested at `2023.06/software/linux/x86_64/intel/skylake_avx512/`

trz42 · 2024-04-14T11:29:04Z

bot: build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell

nessi-bot · 2024-04-14T11:29:07Z

Updates by the bot instance eX3-NESSI (click for details)

received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from trz42
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted

nessi-bot · 2024-04-14T11:29:07Z

Updates by the bot instance AWS-MC-NESSI (click for details)

received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from trz42
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted

nessi-bot · 2024-04-14T11:29:07Z

Updates by the bot instance Saga-NESSI (click for details)

received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from trz42
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- submitted job 11166300, for details & status see {2023.06}[foss/2023a] BWA v0.7.17-20220923 #321 (comment)

nessi-bot · 2024-04-14T11:29:07Z

Updates by the bot instance Fram-NESSI (click for details)

received bot command build inst:Saga-NESSI repo:nessi-2023.06-swl-deb11 arch:x86_64/intel/broadwell from trz42
- expanded format: build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell
handling command build instance:Saga-NESSI repository:nessi-2023.06-swl-deb11 architecture:x86_64/intel/broadwell resulted in:
- no jobs were submitted

nessi-bot · 2024-04-14T11:29:21Z

New job on instance Saga-NESSI for architecture x86_64-intel-broadwell for repository nessi-2023.06-swl-deb11 in job dir /cluster/projects/nn9992k/pilot.nessi.no/jobs/2024.04/pr_321/11166300

date	job status	comment
Apr 14 11:29:20 AM UTC 2024	submitted	job id `11166300` awaits release by job manager
Apr 14 11:30:03 AM UTC 2024	released	job awaits launch by Slurm scheduler
Apr 14 11:31:07 AM UTC 2024	running	job `11166300` is running
Apr 14 11:53:29 AM UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-11166300.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-x86_64-intel-broadwell-1713094376.tar.gz` size: 0 MiB (449234 bytes) entries: 52 modules under 2023.06/software/linux/x86_64/intel/broadwell/modules/all `BWA/0.7.17-20220923-GCCcore-12.3.0.lua` software under 2023.06/software/linux/x86_64/intel/broadwell/software `BWA/0.7.17-20220923-GCCcore-12.3.0` other under 2023.06/software/linux/x86_64/intel/broadwell no other files in tarball
Apr 14 11:53:29 AM UTC 2024	test result	😁 SUCCESS (click triangle for details) ReFrame Summary [ PASSED ] Ran 6/6 test case(s) from 6 check(s) (0 failure(s), 0 skipped, 0 aborted) Details ✅ job output file `slurm-11166300.out` ✅ no message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Apr 14 12:09:12 PM UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-x86_64-intel-broadwell-1713094376.tar.gz` to S3 bucket succeeded
Apr 14 12:11:04 PM UTC 2024	staged	tarball `eessi-2023.06-software-linux-x86_64-intel-broadwell-1713094376.tar.gz` downloaded to Stratum-0
Apr 14 12:11:18 PM UTC 2024	pr_opened	merge PR https://github.com/NorESSI/2024-staging/pull/139 to approve ingest
Apr 14 12:14:01 PM UTC 2024	approved	👍 tarball `eessi-2023.06-software-linux-x86_64-intel-broadwell-1713094376.tar.gz` approved, see PR https://github.com/NorESSI/2024-staging/pull/139
Apr 14 12:16:11 PM UTC 2024	ingested	🎉 tarball `eessi-2023.06-software-linux-x86_64-intel-broadwell-1713094376.tar.gz` successfully ingested at `2023.06/software/linux/x86_64/intel/broadwell/`

trz42 · 2024-04-14T12:08:01Z

Checklist before starting deployment (setting bot:deploy label):

Check if the SPDX license identifier is provided
Check whether builds for all required architectures succeed (SUCCESS message + reasonably sized tarball)
Check if the PR is up-to-date with the target branch nessi.no-2023.06 in the repository (if not what are the differences)
Assess if all requested changes are sound (checking files changed on github.com)
Verify that all easyconfig/s being built are included with the EB version used (if not why not)
Review changes (if any) needed to get the build(s) succeed (common changes for all architectures, changes for a single architecture, changes because of build environment specifics, etc.)

trz42 · 2024-04-14T12:10:12Z

Target architectures

x86_64-intel-broadwell
x86_64-intel-skylake_avx512
x86_64-amd-zen2
x86_64-generic
aarch64-generic

Checklist for deployment/ingestion

at least one tarball for each architecture has been uploaded
at least one tarball for each architecture has been staged
for each staged tarball was a PR for approval/rejection opened
for each architecture one and only one tarball has been approved
for each architecture one and only one tarball was ingested
all tests in the CI have succeeded (rerun failed tests ~ 10 mins after last ingest)
has the package become available via CernVM-FS for all architectures ingested (for lmod cache updates pay attention to timestamp of files)

command & log

command

cd /cvmfs/pilot.nessi.no/versions/2023.06/software/linux ; \
ls -l \
      x86_64/{generic,amd/zen2,intel/[bsc]*}/{software,modules/all}/BWA/0.7.17-20220923* \
      aarch64/generic/{software,modules/all}/BWA/0.7.17-20220923*

log

-rw-r--r-- 1 cvmfs cvmfs 1360 Apr 14 13:16 aarch64/generic/modules/all/BWA/0.7.17-20220923-GCCcore-12.3.0.lua
-rw-rw-r-- 1 cvmfs cvmfs 1360 Apr 14 13:23 x86_64/amd/zen2/modules/all/BWA/0.7.17-20220923-GCCcore-12.3.0.lua
-rw-rw-r-- 1 cvmfs cvmfs 1359 Apr 14 13:23 x86_64/generic/modules/all/BWA/0.7.17-20220923-GCCcore-12.3.0.lua
-rw-rw-r-- 1 cvmfs cvmfs 1367 Apr 14 13:32 x86_64/intel/broadwell/modules/all/BWA/0.7.17-20220923-GCCcore-12.3.0.lua
-rw-rw-r-- 1 cvmfs cvmfs 1372 Apr 14 13:17 x86_64/intel/skylake_avx512/modules/all/BWA/0.7.17-20220923-GCCcore-12.3.0.lua

aarch64/generic/software/BWA/0.7.17-20220923-GCCcore-12.3.0:
total 23
dr-xr-xr-x 2 cvmfs cvmfs 4096 Apr 14 13:16 bin
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:16 easybuild
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:16 include
dr-xr-xr-x 2 cvmfs cvmfs 4096 Apr 14 13:16 lib
lrwxrwxrwx 1 cvmfs cvmfs    3 Apr 14 13:16 lib64 -> lib
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:16 man

x86_64/amd/zen2/software/BWA/0.7.17-20220923-GCCcore-12.3.0:
total 23
dr-xr-xr-x 2 cvmfs cvmfs 4096 Apr 14 13:23 bin
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:23 easybuild
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:23 include
dr-xr-xr-x 2 cvmfs cvmfs 4096 Apr 14 13:23 lib
lrwxrwxrwx 1 cvmfs cvmfs    3 Apr 14 13:23 lib64 -> lib
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:23 man

x86_64/generic/software/BWA/0.7.17-20220923-GCCcore-12.3.0:
total 23
dr-xr-xr-x 2 cvmfs cvmfs 4096 Apr 14 13:23 bin
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:23 easybuild
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:23 include
dr-xr-xr-x 2 cvmfs cvmfs 4096 Apr 14 13:23 lib
lrwxrwxrwx 1 cvmfs cvmfs    3 Apr 14 13:23 lib64 -> lib
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:23 man

x86_64/intel/broadwell/software/BWA/0.7.17-20220923-GCCcore-12.3.0:
total 23
dr-xr-xr-x 2 cvmfs cvmfs 4096 Apr 14 13:32 bin
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:32 easybuild
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:32 include
dr-xr-xr-x 2 cvmfs cvmfs 4096 Apr 14 13:32 lib
lrwxrwxrwx 1 cvmfs cvmfs    3 Apr 14 13:32 lib64 -> lib
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:32 man

x86_64/intel/skylake_avx512/software/BWA/0.7.17-20220923-GCCcore-12.3.0:
total 23
dr-xr-xr-x 2 cvmfs cvmfs 4096 Apr 14 13:17 bin
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:17 easybuild
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:17 include
dr-xr-xr-x 2 cvmfs cvmfs 4096 Apr 14 13:17 lib
lrwxrwxrwx 1 cvmfs cvmfs    3 Apr 14 13:17 lib64 -> lib
dr-xr-xr-x 3 cvmfs cvmfs 4096 Apr 14 13:17 man

poksumdo

Looks good. All ingested. Most CI green.

{2023.06}[foss/2023a] BWA v0.7.17-20220923

52d80ba

trz42 added NESSI/2023.06 sync-with-EESSI labels Apr 14, 2024

trz42 mentioned this pull request Apr 14, 2024

Syncing code-base and CVMFS repository with EESSI (April 2024) #294

Open

51 tasks

trz42 added the bot:deploy label Apr 14, 2024

poksumdo approved these changes Apr 14, 2024

View reviewed changes

poksumdo merged commit f6f54f5 into NorESSI:nessi.no-2023.06 Apr 14, 2024

trz42 added the ingested label Apr 14, 2024

{2023.06}[foss/2023a] BWA v0.7.17-20220923 #321

{2023.06}[foss/2023a] BWA v0.7.17-20220923 #321

Uh oh!

Conversation

trz42 commented Apr 14, 2024

Uh oh!

nessi-bot bot commented Apr 14, 2024

Uh oh!

nessi-bot bot commented Apr 14, 2024

Uh oh!

nessi-bot bot commented Apr 14, 2024

Uh oh!

nessi-bot bot commented Apr 14, 2024

Uh oh!

trz42 commented Apr 14, 2024

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited by trz42 Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited by trz42 Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited by trz42 Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited by trz42 Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

trz42 commented Apr 14, 2024

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

nessi-bot bot commented Apr 14, 2024 • edited by trz42 Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

trz42 commented Apr 14, 2024 • edited Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

trz42 commented Apr 14, 2024 • edited Loading Uh oh! There was an error while loading. Please reload this page.

Uh oh!

Uh oh!

poksumdo left a comment

Choose a reason for hiding this comment

Uh oh!

Reviewers

Assignees

Labels

Projects

Milestone

Development

Uh oh!

3 participants

nessi-bot bot commented Apr 14, 2024 •

edited

Loading

nessi-bot bot commented Apr 14, 2024 •

edited

Loading

nessi-bot bot commented Apr 14, 2024 •

edited

Loading

nessi-bot bot commented Apr 14, 2024 •

edited

Loading

nessi-bot bot commented Apr 14, 2024 •

edited

Loading

nessi-bot bot commented Apr 14, 2024 •

edited by trz42

Loading

nessi-bot bot commented Apr 14, 2024 •

edited by trz42

Loading

nessi-bot bot commented Apr 14, 2024 •

edited by trz42

Loading

nessi-bot bot commented Apr 14, 2024 •

edited by trz42

Loading

nessi-bot bot commented Apr 14, 2024 •

edited

Loading

nessi-bot bot commented Apr 14, 2024 •

edited

Loading

nessi-bot bot commented Apr 14, 2024 •

edited

Loading

nessi-bot bot commented Apr 14, 2024 •

edited

Loading

nessi-bot bot commented Apr 14, 2024 •

edited by trz42

Loading

trz42 commented Apr 14, 2024 •

edited

Loading

trz42 commented Apr 14, 2024 •

edited

Loading