Installation from source creates changes in the local directory #15474
Description
Bug
When installing lightning from source, there remain unstaged changes that show up in git.
Reproduce
- Clone repo
- PACKAGE_NAME=lightning_app pip install -e .
- git status shows file changes for MANIFEST.in, requirements/base.txt, setup.py
Expected behavior
No changed files.
Environment details:
* CUDA:nts/ …uirements.txt
- GPU: None
- available: False
- version: None
* Lightning:
- lightning: 1.8.0
- lightning-app: 1.8.0
- lightning-cloud: 0.5.11
- lightning-lite: 1.8.0
- lightning-utilities: 0.3.0
- pt-lightning-sphinx-theme: 0.0.31
- torch: 1.12.1
- torchmetrics: 0.9.2
- torchvision: 0.13.0
* Packages:
- absl-py: 1.2.0
- aiobotocore: 2.3.4
- aiohttp: 3.8.3
- aioitertools: 0.11.0
- aiosignal: 1.2.0
- alabaster: 0.7.12
- alembic: 1.8.1
- altair: 4.2.0
- antlr4-python3-runtime: 4.9.3
- anyio: 3.6.1
- appnope: 0.1.3
- argon2-cffi: 21.3.0
- argon2-cffi-bindings: 21.2.0
- arrow: 1.2.3
- asgiref: 3.5.2
- asttokens: 2.0.8
- async-generator: 1.10
- async-timeout: 4.0.2
- attrs: 22.1.0
- babel: 2.10.3
- backcall: 0.2.0
- bcrypt: 4.0.1
- beautifulsoup4: 4.11.1
- black: 22.8.0
- bleach: 5.0.1
- blessed: 1.19.1
- blinker: 1.5
- bokeh: 2.4.3
- boto3: 1.24.82
- botocore: 1.24.21
- bracex: 2.3.post1
- bravado: 11.0.3
- bravado-core: 5.17.1
- cachetools: 5.2.0
- certifi: 2022.9.14
- cffi: 1.15.1
- cfgv: 3.3.1
- charset-normalizer: 2.1.1
- click: 8.1.3
- cloudpickle: 2.1.0
- codecov: 2.1.12
- colorama: 0.4.5
- coloredlogs: 15.0.1
- comet-ml: 3.31.7
- commonmark: 0.9.1
- configobj: 5.0.6
- coverage: 6.4.2
- croniter: 1.3.7
- cryptography: 38.0.1
- curio: 1.5
- cycler: 0.11.0
- databricks-cli: 0.17.3
- debugpy: 1.6.3
- decorator: 5.1.1
- deepdiff: 5.8.1
- deepspeed: 0.7.3
- defusedxml: 0.7.1
- distlib: 0.3.6
- dnspython: 2.2.1
- docker: 5.0.3
- docker-pycreds: 0.4.0
- docstring-parser: 0.15
- docutils: 0.17.1
- dulwich: 0.20.46
- email-validator: 1.3.0
- entrypoints: 0.4
- everett: 3.0.0
- exceptiongroup: 1.0.0rc9
- executing: 1.1.0
- fairscale: 0.4.10
- fastapi: 0.82.0
- fastjsonschema: 2.16.2
- ffmpy: 0.3.0
- filelock: 3.8.0
- fire: 0.4.0
- flake8: 5.0.4
- flask: 2.2.2
- flatbuffers: 22.9.24
- fonttools: 4.37.3
- frozenlist: 1.3.1
- fsspec: 2022.7.1
- future: 0.18.2
- gcsfs: 2022.7.1
- gitdb: 4.0.9
- gitpython: 3.1.27
- google-api-core: 2.8.2
- google-auth: 2.12.0
- google-auth-oauthlib: 0.4.6
- google-cloud-core: 2.3.2
- google-cloud-storage: 2.5.0
- google-crc32c: 1.5.0
- google-resumable-media: 2.3.3
- googleapis-common-protos: 1.56.4
- gradio: 3.6
- greenlet: 1.1.2
- grpcio: 1.49.1
- gunicorn: 20.1.0
- gym: 0.24.1
- gym-notices: 0.0.8
- h11: 0.12.0
- hjson: 3.1.0
- httpcore: 0.15.0
- httptools: 0.5.0
- httpx: 0.23.0
- humanfriendly: 10.0
- hydra-core: 1.2.0
- identify: 2.5.5
- idna: 3.4
- imagesize: 1.4.1
- importlib-metadata: 4.12.0
- iniconfig: 1.1.1
- inquirer: 2.10.0
- ipykernel: 6.16.0
- ipyparallel: 8.4.1
- ipython: 8.5.0
- ipython-genutils: 0.2.0
- ipywidgets: 8.0.2
- isort: 5.10.1
- itsdangerous: 2.1.2
- jedi: 0.18.1
- jinja2: 3.0.3
- jmespath: 1.0.1
- joblib: 1.2.0
- jsonargparse: 4.15.2
- jsonpointer: 2.3
- jsonref: 0.2
- jsonschema: 3.2.0
- jupyter-client: 7.3.5
- jupyter-core: 4.11.1
- jupyterlab-pygments: 0.2.2
- jupyterlab-widgets: 3.0.3
- kiwisolver: 1.4.4
- lightning: 1.8.0
- lightning-app: 1.8.0
- lightning-cloud: 0.5.11
- lightning-lite: 1.8.0
- lightning-utilities: 0.3.0
- linkify-it-py: 1.0.3
- livereload: 2.6.3
- lxml: 4.9.1
- mako: 1.2.3
- markdown: 3.4.1
- markdown-it-py: 2.1.0
- markupsafe: 2.1.1
- matplotlib: 3.5.2
- matplotlib-inline: 0.1.6
- mccabe: 0.7.0
- mdit-py-plugins: 0.3.1
- mdurl: 0.1.2
- mistune: 2.0.4
- mlflow: 1.28.0
- monotonic: 1.6
- mpmath: 1.2.1
- msgpack: 1.0.4
- multidict: 6.0.2
- mypy: 0.971
- mypy-extensions: 0.4.3
- myst-parser: 0.16.1
- nbclient: 0.6.8
- nbconvert: 7.0.0
- nbformat: 5.6.1
- nbsphinx: 0.8.9
- neptune-client: 0.16.7
- nest-asyncio: 1.5.5
- ninja: 1.10.2.4
- nodeenv: 1.7.0
- notebook: 6.4.12
- numpy: 1.23.0
- nvidia-ml-py3: 7.352.0
- oauthlib: 3.2.1
- omegaconf: 2.2.3
- onnxruntime: 1.12.1
- ordered-set: 4.1.0
- orjson: 3.8.0
- outcome: 1.2.0
- packaging: 21.3
- pandas: 1.5.0
- pandoc: 2.2
- pandocfilters: 1.5.0
- panel: 0.14.0
- param: 1.12.2
- paramiko: 2.11.0
- parso: 0.8.3
- pathspec: 0.10.1
- pathtools: 0.1.2
- pexpect: 4.8.0
- pickleshare: 0.7.5
- pillow: 9.2.0
- pip: 22.1.2
- pipdeptree: 2.3.1
- platformdirs: 2.5.2
- playwright: 1.22.0
- pluggy: 1.0.0
- plumbum: 1.8.0
- ply: 3.11
- pre-commit: 2.20.0
- prometheus-client: 0.14.1
- prometheus-flask-exporter: 0.20.3
- promise: 2.3
- prompt-toolkit: 3.0.31
- protobuf: 3.19.5
- psutil: 5.9.2
- pt-lightning-sphinx-theme: 0.0.31
- ptyprocess: 0.7.0
- pure-eval: 0.2.2
- py: 1.11.0
- py-cpuinfo: 8.0.0
- pyarrow: 9.0.0
- pyasn1: 0.4.8
- pyasn1-modules: 0.2.8
- pycodestyle: 2.9.1
- pycparser: 2.21
- pycryptodome: 3.15.0
- pyct: 0.4.8
- pydantic: 1.10.2
- pydeck: 0.8.0b3
- pydeprecate: 0.3.2
- pydub: 0.25.1
- pyee: 8.1.0
- pyflakes: 2.5.0
- pygame: 2.1.0
- pygments: 2.13.0
- pyjwt: 2.5.0
- pympler: 1.0.1
- pynacl: 1.5.0
- pyparsing: 3.0.9
- pyrsistent: 0.18.1
- pytest: 7.1.2
- pytest-asyncio: 0.19.0
- pytest-cov: 3.0.0
- pytest-forked: 1.4.0
- pytest-rerunfailures: 10.2
- pytest-timeout: 2.1.0
- python-dateutil: 2.8.2
- python-dotenv: 0.21.0
- python-editor: 1.0.4
- python-multipart: 0.0.5
- pytz: 2022.2.1
- pytz-deprecation-shim: 0.1.0.post0
- pyviz-comms: 2.2.1
- pyyaml: 6.0
- pyzmq: 24.0.1
- qtconsole: 5.3.2
- qtpy: 2.2.0
- querystring-parser: 1.2.4
- readchar: 4.0.3
- requests: 2.28.1
- requests-oauthlib: 1.3.1
- requests-toolbelt: 0.9.1
- rfc3986: 1.5.0
- rfc3987: 1.3.8
- rich: 12.6.0
- rsa: 4.9
- s3fs: 2022.7.1
- s3transfer: 0.6.0
- scikit-learn: 1.1.2
- scipy: 1.9.1
- semantic-version: 2.10.0
- semver: 2.13.0
- send2trash: 1.8.0
- sentry-sdk: 1.9.9
- setproctitle: 1.3.2
- setuptools: 59.5.0
- shortuuid: 1.0.9
- simplejson: 3.17.6
- six: 1.16.0
- smmap: 5.0.0
- sniffio: 1.3.0
- snowballstemmer: 2.2.0
- sortedcontainers: 2.4.0
- soupsieve: 2.3.2.post1
- sphinx: 4.5.0
- sphinx-autobuild: 2021.3.14
- sphinx-autodoc-typehints: 1.14.1
- sphinx-copybutton: 0.5.0
- sphinx-multiproject: 1.0.0rc1
- sphinx-paramlinks: 0.5.4
- sphinx-togglebutton: 0.3.2
- sphinxcontrib-applehelp: 1.0.2
- sphinxcontrib-devhelp: 1.0.2
- sphinxcontrib-fulltoc: 1.2.0
- sphinxcontrib-htmlhelp: 2.0.0
- sphinxcontrib-jsmath: 1.0.1
- sphinxcontrib-mockautodoc: 0.0.1.dev20130518
- sphinxcontrib-qthelp: 1.0.3
- sphinxcontrib-serializinghtml: 1.1.5
- sqlalchemy: 1.4.41
- sqlparse: 0.4.3
- stack-data: 0.5.1
- starlette: 0.19.1
- starsessions: 1.3.0
- streamlit: 1.13.0
- strict-rfc3339: 0.7
- swagger-spec-validator: 2.7.6
- sympy: 1.11.1
- tabulate: 0.8.10
- tensorboard: 2.10.1
- tensorboard-data-server: 0.6.1
- tensorboard-plugin-wit: 1.8.1
- termcolor: 2.0.1
- terminado: 0.15.0
- testpath: 0.6.0
- threadpoolctl: 3.1.0
- tinycss2: 1.1.1
- toml: 0.10.2
- tomli: 2.0.1
- toolz: 0.12.0
- torch: 1.12.1
- torchmetrics: 0.9.2
- torchvision: 0.13.0
- tornado: 6.2
- tqdm: 4.64.1
- traitlets: 5.4.0
- trio: 0.21.0
- types-protobuf: 3.20.4
- types-pyyaml: 6.0.12
- types-requests: 2.28.11
- types-setuptools: 65.3.0
- types-six: 1.16.21
- types-ujson: 5.5.0
- types-urllib3: 1.26.25
- typing-extensions: 4.3.0
- tzdata: 2022.4
- tzlocal: 4.2
- uc-micro-py: 1.0.1
- ujson: 5.5.0
- urllib3: 1.26.12
- uvicorn: 0.17.6
- uvloop: 0.17.0
- validators: 0.20.0
- virtualenv: 20.16.5
- wandb: 0.13.3
- watchfiles: 0.17.0
- watchgod: 0.8.2
- wcmatch: 8.4.1
- wcwidth: 0.2.5
- webcolors: 1.12
- webencodings: 0.5.1
- websocket-client: 1.4.1
- websockets: 10.1
- werkzeug: 2.2.2
- wheel: 0.37.1
- widgetsnbextension: 4.0.3
- wrapt: 1.14.1
- wurlitzer: 3.0.2
- yarl: 1.8.1
- zipp: 3.8.1
* System:
- OS: Darwin
- architecture:
- 64bit
-
- processor: arm
- python: 3.9.13
- version: Darwin Kernel Version 21.5.0: Tue Apr 26 21:08:37 PDT 2022; root:xnu-8020.121.3~4/RELEASE_ARM64_T6000