{2023.06,a64fx}[foss/2023a] R v4.3.2 #681

boegel · 2024-08-21T16:51:30Z

Step up towards #680, which is stuck due to a tricky problem with a dependency of R-bundle-CRAN...

eessi-bot · 2024-08-21T16:51:34Z

Instance eessi-bot-mc-aws is configured to build for:

architectures: x86_64/generic, x86_64/intel/haswell, x86_64/intel/skylake_avx512, x86_64/amd/zen2, x86_64/amd/zen3, aarch64/generic, aarch64/neoverse_n1, aarch64/neoverse_v1
repositories: eessi.io-2023.06-compat, eessi-hpc.org-2023.06-software, eessi-hpc.org-2023.06-compat, eessi.io-2023.06-software

eessi-build-deploy-bot-deucalion · 2024-08-21T16:51:34Z

Instance boegel-bot-deucalion is configured to build for:

architectures: aarch64/a64fx
repositories: eessi.io-2023.06-software

eessi-bot · 2024-08-21T16:51:35Z

Instance eessi-bot-mc-azure is configured to build for:

architectures: x86_64/amd/zen4
repositories: eessi.io-2023.06-compat, eessi-hpc.org-2023.06-compat, eessi-hpc.org-2023.06-software, eessi.io-2023.06-software

boegel · 2024-08-21T16:51:38Z

bot: build repo:eessi.io-2023.06-software arch:aarch64/a64fx

eessi-build-deploy-bot-deucalion · 2024-08-21T16:51:41Z

Updates by the bot instance boegel-bot-deucalion (click for details)

received bot command build repo:eessi.io-2023.06-software arch:aarch64/a64fx from boegel
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/a64fx
handling command build repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:
- submitted job 72500, for details & status see {2023.06,a64fx}[foss/2023a] R v4.3.2 #681 (comment)

eessi-bot · 2024-08-21T16:51:41Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi.io-2023.06-software arch:aarch64/a64fx from boegel
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/a64fx
handling command build repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:
- no jobs were submitted

eessi-bot · 2024-08-21T16:51:41Z

Updates by the bot instance eessi-bot-mc-azure (click for details)

received bot command build repo:eessi.io-2023.06-software arch:aarch64/a64fx from boegel
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/a64fx
handling command build repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:
- no jobs were submitted

eessi-build-deploy-bot-deucalion · 2024-08-21T16:51:46Z

New job on instance boegel-bot-deucalion for architecture aarch64-a64fx for repository eessi.io-2023.06-software in job dir /home/kehoste/project_dir/bot/jobs/2024.08/pr_681/72500

date	job status	comment
Aug 21 16:51:45 UTC 2024	submitted	job id `72500` awaits release by job manager
Aug 21 16:52:28 UTC 2024	released	job awaits launch by Slurm scheduler
Aug 21 16:53:32 UTC 2024	running	job `72500` is running
Aug 21 18:42:28 UTC 2024	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-72500.out` ❌ found message matching `ERROR:` ✅ no message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-a64fx-1724265576.tar.gz` size: 269 MiB (282270492 bytes) entries: 9634 modules under 2023.06/software/linux/aarch64/a64fx/modules/all `Java/11.0.20.lua` `Java/.modulerc.lua` `jbigkit/2.1-GCCcore-12.3.0.lua` `libdeflate/1.18-GCCcore-12.3.0.lua` `libgit2/1.7.1-GCCcore-12.3.0.lua` `LibTIFF/4.5.0-GCCcore-12.3.0.lua` `PCRE/8.45-GCCcore-12.3.0.lua` `R/4.3.2-gfbf-2023a.lua` `Tk/8.6.13-GCCcore-12.3.0.lua` software under 2023.06/software/linux/aarch64/a64fx/software `Java/11.0.20` `jbigkit/2.1-GCCcore-12.3.0` `libdeflate/1.18-GCCcore-12.3.0` `libgit2/1.7.1-GCCcore-12.3.0` `LibTIFF/4.5.0-GCCcore-12.3.0` `PCRE/8.45-GCCcore-12.3.0` `R/4.3.2-gfbf-2023a` `Tk/8.6.13-GCCcore-12.3.0` other under 2023.06/software/linux/aarch64/a64fx no other files in tarball
Aug 21 18:42:28 UTC 2024	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-72500.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

boegel · 2024-08-22T09:14:26Z

Failed because hatchling/1.18.0-GCCcore-12.3.0 is temporary unavailable for A64FX, see #669

Neves-P · 2024-08-22T19:45:06Z

Failed because hatchling/1.18.0-GCCcore-12.3.0 is temporary unavailable for A64FX, see #669

@boegel, hatchling should be available now 🤞

boegel · 2024-08-22T19:54:00Z

bot: build repo:eessi.io-2023.06-software arch:aarch64/a64fx

eessi-bot · 2024-08-22T19:54:04Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi.io-2023.06-software arch:aarch64/a64fx from boegel
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/a64fx
handling command build repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:
- no jobs were submitted

eessi-build-deploy-bot-deucalion · 2024-08-22T19:54:04Z

Updates by the bot instance boegel-bot-deucalion (click for details)

received bot command build repo:eessi.io-2023.06-software arch:aarch64/a64fx from boegel
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/a64fx
handling command build repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:
- submitted job 72607, for details & status see {2023.06,a64fx}[foss/2023a] R v4.3.2 #681 (comment)

eessi-bot · 2024-08-22T19:54:04Z

Updates by the bot instance eessi-bot-mc-azure (click for details)

received bot command build repo:eessi.io-2023.06-software arch:aarch64/a64fx from boegel
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/a64fx
handling command build repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:
- no jobs were submitted

eessi-build-deploy-bot-deucalion · 2024-08-22T19:54:09Z

New job on instance boegel-bot-deucalion for architecture aarch64-a64fx for repository eessi.io-2023.06-software in job dir /home/kehoste/project_dir/bot/jobs/2024.08/pr_681/72607

date	job status	comment
Aug 22 19:54:08 UTC 2024	submitted	job id `72607` awaits release by job manager
Aug 22 19:54:43 UTC 2024	released	job awaits launch by Slurm scheduler
Aug 23 12:24:58 UTC 2024	running	job `72607` is running
Aug 23 14:16:04 UTC 2024	finished	😢 FAILURE (click triangle for details) Details ✅ job output file `slurm-72607.out` ❌ found message matching `ERROR:` ✅ no message matching `FAILED:` ❌ found message matching `required modules missing:` ❌ no message matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-a64fx-1724422369.tar.gz` size: 269 MiB (282267687 bytes) entries: 9634 modules under 2023.06/software/linux/aarch64/a64fx/modules/all `Java/11.0.20.lua` `Java/.modulerc.lua` `jbigkit/2.1-GCCcore-12.3.0.lua` `libdeflate/1.18-GCCcore-12.3.0.lua` `libgit2/1.7.1-GCCcore-12.3.0.lua` `LibTIFF/4.5.0-GCCcore-12.3.0.lua` `PCRE/8.45-GCCcore-12.3.0.lua` `R/4.3.2-gfbf-2023a.lua` `Tk/8.6.13-GCCcore-12.3.0.lua` software under 2023.06/software/linux/aarch64/a64fx/software `Java/11.0.20` `jbigkit/2.1-GCCcore-12.3.0` `libdeflate/1.18-GCCcore-12.3.0` `libgit2/1.7.1-GCCcore-12.3.0` `LibTIFF/4.5.0-GCCcore-12.3.0` `PCRE/8.45-GCCcore-12.3.0` `R/4.3.2-gfbf-2023a` `Tk/8.6.13-GCCcore-12.3.0` other under 2023.06/software/linux/aarch64/a64fx no other files in tarball
Aug 23 14:16:04 UTC 2024	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-72607.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`

boegel · 2024-08-26T08:51:21Z

bot: build repo:eessi.io-2023.06-software arch:aarch64/a64fx

eessi-bot · 2024-08-26T08:51:24Z

Updates by the bot instance eessi-bot-mc-aws (click for details)

received bot command build repo:eessi.io-2023.06-software arch:aarch64/a64fx from boegel
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/a64fx
handling command build repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:
- no jobs were submitted

eessi-build-deploy-bot-deucalion · 2024-08-26T08:51:25Z

Updates by the bot instance boegel-bot-deucalion (click for details)

received bot command build repo:eessi.io-2023.06-software arch:aarch64/a64fx from boegel
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/a64fx
handling command build repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:
- submitted job 87819, for details & status see {2023.06,a64fx}[foss/2023a] R v4.3.2 #681 (comment)

eessi-bot · 2024-08-26T08:51:25Z

Updates by the bot instance eessi-bot-mc-azure (click for details)

received bot command build repo:eessi.io-2023.06-software arch:aarch64/a64fx from boegel
- expanded format: build repository:eessi.io-2023.06-software architecture:aarch64/a64fx
handling command build repository:eessi.io-2023.06-software architecture:aarch64/a64fx resulted in:
- no jobs were submitted

eessi-build-deploy-bot-deucalion · 2024-08-26T08:51:30Z

New job on instance boegel-bot-deucalion for architecture aarch64-a64fx for repository eessi.io-2023.06-software in job dir /home/kehoste/project_dir/bot/jobs/2024.08/pr_681/87819

date	job status	comment
Aug 26 08:51:29 UTC 2024	submitted	job id `87819` awaits release by job manager
Aug 26 08:51:39 UTC 2024	released	job awaits launch by Slurm scheduler
Aug 26 08:52:41 UTC 2024	running	job `87819` is running
Aug 26 10:45:13 UTC 2024	finished	😁 SUCCESS (click triangle for details) Details ✅ job output file `slurm-87819.out` ✅ no message matching `ERROR:` ✅ no message matching `FAILED:` ✅ no message matching `required modules missing:` ✅ found message(s) matching `No missing installations` ✅ found message matching `.tar.gz created!` Artefacts `eessi-2023.06-software-linux-aarch64-a64fx-1724668936.tar.gz` size: 269 MiB (282276591 bytes) entries: 9634 modules under 2023.06/software/linux/aarch64/a64fx/modules/all `Java/11.0.20.lua` `Java/.modulerc.lua` `jbigkit/2.1-GCCcore-12.3.0.lua` `libdeflate/1.18-GCCcore-12.3.0.lua` `libgit2/1.7.1-GCCcore-12.3.0.lua` `LibTIFF/4.5.0-GCCcore-12.3.0.lua` `PCRE/8.45-GCCcore-12.3.0.lua` `R/4.3.2-gfbf-2023a.lua` `Tk/8.6.13-GCCcore-12.3.0.lua` software under 2023.06/software/linux/aarch64/a64fx/software `Java/11.0.20` `jbigkit/2.1-GCCcore-12.3.0` `libdeflate/1.18-GCCcore-12.3.0` `libgit2/1.7.1-GCCcore-12.3.0` `LibTIFF/4.5.0-GCCcore-12.3.0` `PCRE/8.45-GCCcore-12.3.0` `R/4.3.2-gfbf-2023a` `Tk/8.6.13-GCCcore-12.3.0` other under 2023.06/software/linux/aarch64/a64fx no other files in tarball
Aug 26 10:45:13 UTC 2024	test result	😢 FAILURE (click triangle for details) Reason EESSI test suite was not run, test step itself failed to execute. Details ✅ job output file `slurm-87819.out` ❌ found message matching `ERROR:` ✅ no message matching `[\sFAILED\s].Ran . test case`
Aug 26 14:37:37 UTC 2024	uploaded	transfer of `eessi-2023.06-software-linux-aarch64-a64fx-1724668936.tar.gz` to S3 bucket succeeded

trz42

lgtm

bedroge

$ ls /cvmfs/software.eessi.io/versions/2023.06/software/linux/aarch64/a64fx/software/R/4.3.2-gfbf-2023a/
bin  easybuild  lib  lib64  share

Lgtm!

{2023.06,a64fx}[foss/2023a] R v4.3.2

00839e1

boegel added 2023.06-software.eessi.io 2023.06 version of software.eessi.io a64fx labels Aug 21, 2024

trz42 approved these changes Aug 26, 2024

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boegel added the bot:deploy Ask bot to deploy missing software installations to EESSI label Aug 26, 2024

bedroge approved these changes Aug 27, 2024

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bedroge merged commit f98f5cd into EESSI:2023.06-software.eessi.io Aug 27, 2024

boegel deleted the 2023.06-software.eessi.io_a64fx_R432 branch August 27, 2024 07:34

{2023.06,a64fx}[foss/2023a] R v4.3.2 #681

{2023.06,a64fx}[foss/2023a] R v4.3.2 #681

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