Skip to content

CI-830 - Allow specifying files to upload on non-interactive CLI #170

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom
Merged
merged 3 commits into from
Sep 10, 2025
Merged

CI-830 - Allow specifying files to upload on non-interactive CLI #170

merged 3 commits into from
Sep 10, 2025

Conversation

@nathanthorpe
Copy link
Contributor

@nathanthorpe nathanthorpe commented Sep 9, 2025 •
edited
Loading

CI-830

Add --file CLI option to upload to allow the user to specify individual files to upload.

cirro upload \
  --project "Test Project 1" \
  --name "test" \
  --file "sample1.fastq.gz" \
  --file "sample2.fastq.gz" \
  --data-directory "~/data" \
  --data-type "Paired DNA"

Includes some other cleanup and add command line example to readme (to show quote usage)

@nathanthorpe nathanthorpe requested a review from a team September 9, 2025 19:00
@sonarqubecloud
Copy link

sonarqubecloud bot commented Sep 9, 2025

Quality Gate Passed Quality Gate passed

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
0.0% Duplication on New Code

See analysis details on SonarQube Cloud

@nathanthorpe nathanthorpe merged commit 66cf501 into main Sep 10, 2025
9 checks passed
@nathanthorpe nathanthorpe deleted the allow-specifying-files-to-upload branch September 10, 2025 00:03
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Reviewers

@wleepang wleepang wleepang approved these changes

Assignees

No one assigned

Labels

None yet

Projects

None yet

Milestone

No milestone

Development

Successfully merging this pull request may close these issues.

3 participants

@nathanthorpe @wleepang