Neuroimaging is a lot like Legos ! You collect the perfect processing bricks and follow the instructions of the scientific community to assemble your pipeline, à la legoset. Let's make it fun !
- Containerize everything : Create perfect lego bricks others can use in their own sets !
- A central framework for lightspeed, lightweight, reproducible and versionned builds of neuroimaging containers
- Uses
docker buildx baketo optimize build artifacts caching (faster builds) and image layer sharing (leaner containers)
- Automate everything : Pre-assemble legosets so everybody can play !
- A central repository for the neuroimaging workflow automation, using Nextflow, backed by nf-core
- Growing library of processing modules to target common and cutting-edge practices in modern neuroimaging
- Uniformized collection of subworkflows to target complex and confusing sub-parts of the neuroimaging workflow
- Thorough development guidelines, idiosyncratic C/I practices, well-crafted in-depth tutorials
- Enable everyone : Share legos and legosets to everyone, everywhere around the world !
- Neuronetes is a Work In Progress, a home and framework for the neuroimaging community to share expertise, data, tools, processing power, and more !
- Valcourt Caron, A., Corbin, N., Boissenin, A., Gupta, A., Nguyen, T.-H., Anandra, S., Miraux, S., Descoteaux, M., Petit, L., Wagner, F.B. (2025) In vivo submillimeter diffusion MRI dataset of 9 macaque brains curated for tractography. Nature Scientific Data
- Valcourt Caron, A., Shmuel, A., Hao, Z., Descoteaux, M. (2023). versaFlow: a versatile pipeline for resolution adapted diffusion MRI processing and its application to studying the variability of the PRIME-DE database. Frontiers in Neuroinformatics