20241206-Update-01

[unixwzrd]

Refactor update/repair help_sys.sh, genmd script and update CHANGELOG

• Streamlined file tree generation and improved debug level handling in genmd script.
• Added symlink following and token counting for markdown bundles.
• Addressed minor config file issues.
• Enhanced logging in genmd and help_sys.sh for better debugging.
• Updated CHANGELOG with latest changes.

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This discussion was created from the release 20241206-Update-01.