From feaf73a08128099b96e8254bae56ccaf823a0a38 Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Wed, 26 May 2021 08:31:25 -0400 Subject: [PATCH 01/19] refactor: move activities to about section --- content/about/_index.md | 15 +++++++++++++++ content/flu/_index.md | 21 --------------------- 2 files changed, 15 insertions(+), 21 deletions(-) diff --git a/content/about/_index.md b/content/about/_index.md index c533143a8..1feac84e5 100644 --- a/content/about/_index.md +++ b/content/about/_index.md @@ -49,3 +49,18 @@ Public health authorities (federal, state, local), the healthcare industry, the - An enormous database of medical insurance claims that have been de-identified in accordance with HIPAA privacy regulations, covering more than half the US population, made possible through health system partners including Change Healthcare. We use this to produce a new [syndromic COVID-19 indicator based on doctor visits]({{< relref "2020-10-14-dv-signal" >}}), and other indicators based on hospitalizations and ICU admissions. - Since April 2020, we've been supporting and advising U.S. CDC in their community-driven COVID-19 forecasting effort, which includes [creating and evaluating an ensemble forecast]({{< relref "2020-09-21-forecast-demo" >}}) from the 70+ forecasts under submission that serves as the basis for the [CDC's official COVID-19 forecast communications](https://www.cdc.gov/coronavirus/2019-ncov/covid-data/forecasting-us.html). We also contribute our own short-term forecasts of COVID-19 cases and deaths, which can be found in the [COVID-19 Forecast Hub](https://covid19forecasthub.org). + + +### Activities + +We have participated, and [have done very well](https://www.cs.cmu.edu/~roni/CDC%20Flu%20Challenge%202014-2018%20Results.pdf), in all epidemiological forecasting challenges organized by the US government to date: + + + +* [Forecasting Seasonal Influenza in the US](https://www.cdc.gov/flu/weekly/flusight/) by [CDC](https://www.cdc.gov) 2013 -- current +* [Forecasting Dengue in Puerto Rico and Peru](https://predict.cdc.gov/post/5a4fcc3e2c1b1669c22aa261) by the [White House](https://www.whitehouse.gov/) [OSTP](https://www.whitehouse.gov/administration/eop/ostp) +* [Forecasting the Chikungunya invasion of the Americas](https://www.innocentive.com/ar/challenge/9933617") by [DARPA](https://www.darpa.mil/) diff --git a/content/flu/_index.md b/content/flu/_index.md index 37e952613..be2f02380 100644 --- a/content/flu/_index.md +++ b/content/flu/_index.md @@ -7,27 +7,6 @@ layout: single {{}} -## Activities - -We have participated, and [have done very well](https://www.cs.cmu.edu/~roni/CDC%20Flu%20Challenge%202014-2018%20Results.pdf), in all epidemiological forecasting challenges organized by the US government to date: - - - -### [Forecasting Seasonal Influenza in the US](https://www.cdc.gov/flu/weekly/flusight/) - -by [CDC](https://www.cdc.gov) 2013 -- current - -### [Forecasting Dengue in Puerto Rico and Peru](https://predict.cdc.gov/post/5a4fcc3e2c1b1669c22aa261) - -by the [White House](https://www.whitehouse.gov/) [OSTP](https://www.whitehouse.gov/administration/eop/ostp) - -### [Forecasting the Chikungunya invasion of the Americas](https://www.innocentive.com/ar/challenge/9933617") - -by [DARPA](https://www.darpa.mil/) ## Publicly Available Tools From f71d27a6576b5379afedaf07f8bbcc93c5d0b474 Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Wed, 26 May 2021 08:41:58 -0400 Subject: [PATCH 02/19] refactor: change footer for toos --- themes/delphi/layouts/partials/footer.html | 6 +++++- 1 file changed, 5 insertions(+), 1 deletion(-) diff --git a/themes/delphi/layouts/partials/footer.html b/themes/delphi/layouts/partials/footer.html index 1e7493e77..7676904eb 100644 --- a/themes/delphi/layouts/partials/footer.html +++ b/themes/delphi/layouts/partials/footer.html @@ -23,14 +23,18 @@
Resources
>Research & Publications +
  • + Tools +
  • API
  • GitHub
    • -
  • Blog
    • About
    From 75dc94bdb17fb0c01673e090212b0c72f773fde0 Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Wed, 26 May 2021 13:46:56 -0400 Subject: [PATCH 03/19] feat: v1 menu restructure --- config.toml | 200 ++++++++++++------ content/covid19/_index.md | 6 + content/flu/_index.md | 13 +- content/forecasting/_index.md | 6 + content/tools/_index.md | 15 ++ content/{ => tools}/systems/crowdcast.md | 0 content/{ => tools}/systems/forecast.md | 0 content/{ => tools}/systems/index.md | 0 content/{ => tools}/systems/nowcast.md | 0 content/tools/{ => tools}/epidata.md | 0 content/tools/{ => tools}/epiforecast.md | 0 content/tools/{ => tools}/epivis.md | 0 content/tools/{ => tools}/fluscores.md | 0 content/tools/{ => tools}/index.md | 0 content/tools/{ => tools}/nowcast.md | 0 content/tools/{ => tools}/utils.md | 0 themes/delphi/layouts/shortcodes/systems.html | 2 +- themes/delphi/layouts/shortcodes/tools.html | 2 +- 18 files changed, 164 insertions(+), 80 deletions(-) create mode 100644 content/covid19/_index.md create mode 100644 content/forecasting/_index.md create mode 100644 content/tools/_index.md rename content/{ => tools}/systems/crowdcast.md (100%) rename content/{ => tools}/systems/forecast.md (100%) rename content/{ => tools}/systems/index.md (100%) rename content/{ => tools}/systems/nowcast.md (100%) rename content/tools/{ => tools}/epidata.md (100%) rename content/tools/{ => tools}/epiforecast.md (100%) rename content/tools/{ => tools}/epivis.md (100%) rename content/tools/{ => tools}/fluscores.md (100%) rename content/tools/{ => tools}/index.md (100%) rename content/tools/{ => tools}/nowcast.md (100%) rename content/tools/{ => tools}/utils.md (100%) diff --git a/config.toml b/config.toml index ac840098e..570222655 100644 --- a/config.toml +++ b/config.toml @@ -15,6 +15,8 @@ relativeURLs = false pre = "solid/info-circle" url = "/about" weight = 1 + +# About [[menu.main]] parent = "about" name = "Delphi Research Group" @@ -35,106 +37,170 @@ relativeURLs = false name = "Publications" url = "/about/publications" weight = 4 +[[menu.main]] + parent = "about" + name = "Blog" + url = "/blog" + weight = 5 [[menu.main]] parent = "about" name = "News" url = "/about/news" - weight = 4 -[[menu.main]] - identifier = "covidcast" - name = "COVIDcast" - pre = "solid/map" - url = "/covidcast/" - weight = 2 + weight = 6 [[menu.main]] - parent = "covidcast" - name = "COVIDcast Overview" - url = "/covidcast/" - weight = 1 + parent = "about" + name = "GitHub" + url = "https://github.com/cmu-delphi/" + weight = 7 + +# covid19 [[menu.main]] - parent = "covidcast" - name = "Explore a Location" - url = "/covidcast/summary" + identifier = "covid19" + name = "COVID-19" + pre = "solid/virus" + url = "/covid19/" weight = 2 [[menu.main]] - parent = "covidcast" - name = "Explore an Indicator" - url = "/covidcast/indicator" - weight = 3 -[[menu.main]] - parent = "covidcast" - name = "Explore Correlations" - url = "/covidcast/correlation" - weight = 4 -[[menu.main]] - parent = "covidcast" - name = "Classic Map" - url = "/covidcast/classic" - weight = 30 -[[menu.main]] - parent = "covidcast" - name = "Forecast Evaluation" - url = "/forecast-eval/" - weight = 40 + parent = "covid19" + name = "Delphi's COVID-19 Response Team" + url = "/covid19/" + weight = 1 [[menu.main]] - parent = "covidcast" + parent = "covid19" name = "Surveys" url = "/covidcast/surveys" - weight = 50 + weight = 10 [[menu.main]] - parent = "covidcast" + parent = "covid19" name = "Survey Results" url = "/covidcast/survey-results" - weight = 51 + weight = 11 [[menu.main]] - parent = "covidcast" - name = "Indicator Status Overview" - url = "/covidcast/indicator-status" - weight = 60 + identifier = "covid19-covidcast" + parent = "covid19" + name = "COVIDcast" + url = "/covidcast/" + weight = 20 [[menu.main]] - parent = "covidcast" + parent = "covid19" name = "Export Data" url = "/covidcast/export" - weight = 70 -[[menu.main]] - parent = "covidcast" - name = "Data Anomalies" - url = "/covidcast/data-anomalies" - weight = 71 -[[menu.main]] - parent = "covidcast" - name = "Release Log" - url = "/covidcast/release-log" - weight = 80 + weight = 30 [[menu.main]] - parent = "covidcast" + parent = "covid19" name = "Terms Of Use" url = "/covidcast/terms-of-use" - weight = 90 + weight = 40 + +# flu [[menu.main]] identifier = "flu" - name = "Flu and Other Diseases" - pre = "solid/virus" - url = "/flu" + name = "Flu" + pre = "solid/disease" + url = "/flu/" weight = 3 [[menu.main]] - identifier = "blog" - name = "Blog" - pre = "solid/book" - url = "/blog" + parent = "flu" + name = "Delphi's Influenca Task Group" + url = "/flu/" + weight = 1 +[[menu.main]] + identifier = "flu-nowcast" + parent = "flu" + name = "Nowcast" + url = "/nowcast/" + weight = 10 +[[menu.main]] + identifier = "flu-crowdcast" + parent = "flu" + name = "Crowdcast" + url = "/crowdcast/" + weight = 20 +[[menu.main]] + identifier = "flu-fluscores" + parent = "flu" + name = "FluScores" + url = "/misc/fluscores/" + weight = 30 + +# forecasting +[[menu.main]] + identifier = "forecasting" + name = "Forecasting" + pre = "solid/binoculars" + url = "/forecasting/" weight = 4 [[menu.main]] - identifier = "github" - name = "GitHub" - pre = "brands/github" - url = "https://github.com/cmu-delphi/" + parent = "forecasting" + name = "Epidemiologic Forecasting" + url = "/forecasting/" + weight = 1 +[[menu.main]] + identifier = "forecasting-eval" + parent = "forecasting" + name = "Forecast Evaluation" + url = "/forecast-eval/" + weight = 10 + +# tools +[[menu.main]] + identifier = "tools" + name = "Tools" + pre = "solid/tools" + url = "/tools/" weight = 5 +[[menu.main]] + parent = "tools" + name = "Delphi Tools" + url = "/tools/" + weight = 1 +[[menu.main]] + parent = "tools" + name = "EpiVis" + url = "/epivis/" + weight = 10 +[[menu.main]] + parent = "tools" + name = "COVIDcast" + url = "/covidcast/" + weight = 20 +[[menu.main]] + parent = "tools" + name = "Indicator Status Overview" + url = "/covidcast/indicator-status" + weight = 30 +[[menu.main]] + parent = "tools" + name = "Dashboard Builder" + url = "/covidcast/dashboard" + weight = 40 +[[menu.main]] + parent = "tools" + name = "Forecast Evaluation" + url = "/forecast-eval/" + weight = 50 +[[menu.main]] + parent = "tools" + name = "Nowcast" + url = "/nowcast/" + weight = 60 +[[menu.main]] + parent = "tools" + name = "Crowdcast" + url = "/crowdcast/" + weight = 70 +[[menu.main]] + parent = "tools" + name = "FluScores" + url = "/misc/fluscores/" + weight = 80 + [[menu.main]] identifier = "api" name = "API" pre = "solid/database" url = "https://cmu-delphi.github.io/delphi-epidata/" - weight = 6 + weight = 100 [params] description = "Developing the Theory and Practice of Epidemiological Forecasting" diff --git a/content/covid19/_index.md b/content/covid19/_index.md new file mode 100644 index 000000000..68f6531da --- /dev/null +++ b/content/covid19/_index.md @@ -0,0 +1,6 @@ +--- +title: COVID-19 +layout: single +--- + +TODO \ No newline at end of file diff --git a/content/flu/_index.md b/content/flu/_index.md index be2f02380..74857acf8 100644 --- a/content/flu/_index.md +++ b/content/flu/_index.md @@ -1,15 +1,6 @@ --- -title: Flu and Other Diseases +title: Flu layout: single --- -## Operational Systems - -{{}} - - -## Publicly Available Tools - -{{}} - -All source code is freely available on [GitHub](https://github.com/cmu-delphi/). +TODO \ No newline at end of file diff --git a/content/forecasting/_index.md b/content/forecasting/_index.md new file mode 100644 index 000000000..3562eaf5a --- /dev/null +++ b/content/forecasting/_index.md @@ -0,0 +1,6 @@ +--- +title: Epidemiological Forecasting +layout: single +--- + +TODO \ No newline at end of file diff --git a/content/tools/_index.md b/content/tools/_index.md new file mode 100644 index 000000000..a2e599ea1 --- /dev/null +++ b/content/tools/_index.md @@ -0,0 +1,15 @@ +--- +title: Tools +layout: single +--- + +## Operational Systems + +{{}} + + +## Publicly Available Tools + +{{}} + +All source code is freely available on [GitHub](https://github.com/cmu-delphi/). diff --git a/content/systems/crowdcast.md b/content/tools/systems/crowdcast.md similarity index 100% rename from content/systems/crowdcast.md rename to content/tools/systems/crowdcast.md diff --git a/content/systems/forecast.md b/content/tools/systems/forecast.md similarity index 100% rename from content/systems/forecast.md rename to content/tools/systems/forecast.md diff --git a/content/systems/index.md b/content/tools/systems/index.md similarity index 100% rename from content/systems/index.md rename to content/tools/systems/index.md diff --git a/content/systems/nowcast.md b/content/tools/systems/nowcast.md similarity index 100% rename from content/systems/nowcast.md rename to content/tools/systems/nowcast.md diff --git a/content/tools/epidata.md b/content/tools/tools/epidata.md similarity index 100% rename from content/tools/epidata.md rename to content/tools/tools/epidata.md diff --git a/content/tools/epiforecast.md b/content/tools/tools/epiforecast.md similarity index 100% rename from content/tools/epiforecast.md rename to content/tools/tools/epiforecast.md diff --git a/content/tools/epivis.md b/content/tools/tools/epivis.md similarity index 100% rename from content/tools/epivis.md rename to content/tools/tools/epivis.md diff --git a/content/tools/fluscores.md b/content/tools/tools/fluscores.md similarity index 100% rename from content/tools/fluscores.md rename to content/tools/tools/fluscores.md diff --git a/content/tools/index.md b/content/tools/tools/index.md similarity index 100% rename from content/tools/index.md rename to content/tools/tools/index.md diff --git a/content/tools/nowcast.md b/content/tools/tools/nowcast.md similarity index 100% rename from content/tools/nowcast.md rename to content/tools/tools/nowcast.md diff --git a/content/tools/utils.md b/content/tools/tools/utils.md similarity index 100% rename from content/tools/utils.md rename to content/tools/tools/utils.md diff --git a/themes/delphi/layouts/shortcodes/systems.html b/themes/delphi/layouts/shortcodes/systems.html index e2ba8d50d..7fc529f41 100644 --- a/themes/delphi/layouts/shortcodes/systems.html +++ b/themes/delphi/layouts/shortcodes/systems.html @@ -1,4 +1,4 @@ -{{ $tools := .Site.GetPage "/systems" }} +{{ $tools := .Site.GetPage "/tools/systems" }} {{ range sort ($tools.Resources.ByType "page") "Params.order" }}

    {{ if isset .Params "externallink" }} diff --git a/themes/delphi/layouts/shortcodes/tools.html b/themes/delphi/layouts/shortcodes/tools.html index 7f4789648..3604c57a4 100644 --- a/themes/delphi/layouts/shortcodes/tools.html +++ b/themes/delphi/layouts/shortcodes/tools.html @@ -1,4 +1,4 @@ -{{ $tools := .Site.GetPage "/tools" }} +{{ $tools := .Site.GetPage "/tools/tools" }} {{ range sort ($tools.Resources.ByType "page") "Params.order" }}

    {{ .Title }}

    {{ .Content }} From 7ca8be55ad00291f263001c91161d22cb6d84e9b Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Thu, 27 May 2021 12:28:29 -0400 Subject: [PATCH 04/19] fix: rename menu entry --- config.toml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/config.toml b/config.toml index 570222655..fa00ee7e6 100644 --- a/config.toml +++ b/config.toml @@ -49,7 +49,7 @@ relativeURLs = false weight = 6 [[menu.main]] parent = "about" - name = "GitHub" + name = "Delphi on GitHub" url = "https://github.com/cmu-delphi/" weight = 7 From 2424e5ee490b82faa2593d3689e0339dcc00a78d Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Thu, 27 May 2021 14:28:27 -0400 Subject: [PATCH 05/19] feat: integrate menu feedback --- config.toml | 39 +++++++++++------------------------ content/forecasting/_index.md | 6 ------ 2 files changed, 12 insertions(+), 33 deletions(-) delete mode 100644 content/forecasting/_index.md diff --git a/config.toml b/config.toml index fa00ee7e6..9357a0a38 100644 --- a/config.toml +++ b/config.toml @@ -19,12 +19,12 @@ relativeURLs = false # About [[menu.main]] parent = "about" - name = "Delphi Research Group" + name = "About Delphi" url = "/about" weight = 1 [[menu.main]] parent = "about" - name = "Team" + name = "Our Team" url = "/about/team" weight = 2 [[menu.main]] @@ -34,7 +34,7 @@ relativeURLs = false weight = 3 [[menu.main]] parent = "about" - name = "Publications" + name = "Research & White Papers" url = "/about/publications" weight = 4 [[menu.main]] @@ -47,11 +47,6 @@ relativeURLs = false name = "News" url = "/about/news" weight = 6 -[[menu.main]] - parent = "about" - name = "Delphi on GitHub" - url = "https://github.com/cmu-delphi/" - weight = 7 # covid19 [[menu.main]] @@ -123,25 +118,6 @@ relativeURLs = false url = "/misc/fluscores/" weight = 30 -# forecasting -[[menu.main]] - identifier = "forecasting" - name = "Forecasting" - pre = "solid/binoculars" - url = "/forecasting/" - weight = 4 -[[menu.main]] - parent = "forecasting" - name = "Epidemiologic Forecasting" - url = "/forecasting/" - weight = 1 -[[menu.main]] - identifier = "forecasting-eval" - parent = "forecasting" - name = "Forecast Evaluation" - url = "/forecast-eval/" - weight = 10 - # tools [[menu.main]] identifier = "tools" @@ -195,6 +171,15 @@ relativeURLs = false url = "/misc/fluscores/" weight = 80 + +[[menu.main]] + identier = "github" + pre = "brands/github" + name = "GitHub" + url = "https://github.com/cmu-delphi/" + weight = 90 + + [[menu.main]] identifier = "api" name = "API" diff --git a/content/forecasting/_index.md b/content/forecasting/_index.md deleted file mode 100644 index 3562eaf5a..000000000 --- a/content/forecasting/_index.md +++ /dev/null @@ -1,6 +0,0 @@ ---- -title: Epidemiological Forecasting -layout: single ---- - -TODO \ No newline at end of file From 565437ac88553b4755677de867bdbbc34aec1eed Mon Sep 17 00:00:00 2001 From: Kathryn M Mazaitis Date: Mon, 7 Jun 2021 14:50:33 -0400 Subject: [PATCH 06/19] Incorporate Roni's suggestions; draft intro text for COVID and Flu sections --- config.toml | 16 ++++++++-------- content/covid19/_index.md | 9 ++++++++- content/flu/_index.md | 4 ++-- 3 files changed, 18 insertions(+), 11 deletions(-) diff --git a/config.toml b/config.toml index 9357a0a38..05b1331f2 100644 --- a/config.toml +++ b/config.toml @@ -60,6 +60,12 @@ relativeURLs = false name = "Delphi's COVID-19 Response Team" url = "/covid19/" weight = 1 +[[menu.main]] + identifier = "covid19-covidcast" + parent = "covid19" + name = "COVIDcast" + url = "/covidcast/" + weight = 20 [[menu.main]] parent = "covid19" name = "Surveys" @@ -70,12 +76,6 @@ relativeURLs = false name = "Survey Results" url = "/covidcast/survey-results" weight = 11 -[[menu.main]] - identifier = "covid19-covidcast" - parent = "covid19" - name = "COVIDcast" - url = "/covidcast/" - weight = 20 [[menu.main]] parent = "covid19" name = "Export Data" @@ -90,13 +90,13 @@ relativeURLs = false # flu [[menu.main]] identifier = "flu" - name = "Flu" + name = "Flu & Other Pathogens" pre = "solid/disease" url = "/flu/" weight = 3 [[menu.main]] parent = "flu" - name = "Delphi's Influenca Task Group" + name = "Delphi Systems for Flu and Other Diseases" url = "/flu/" weight = 1 [[menu.main]] diff --git a/content/covid19/_index.md b/content/covid19/_index.md index 68f6531da..ebfceacbb 100644 --- a/content/covid19/_index.md +++ b/content/covid19/_index.md @@ -3,4 +3,11 @@ title: COVID-19 layout: single --- -TODO \ No newline at end of file +In March 2020, Delphi pivoted from seasonal epidemic forecasting to COVID-19 tracking. Since then, we’ve created and maintained the nation’s largest public repository of diverse, geographically-detailed, real-time indicators of COVID-19 activity in the U.S. Our indicators cover every rung of the severity pyramid, and are freely available through our public API or our data export tool. + +Several of the underlying data sources (on which these indicators are built) would not exist or be publicly available without our efforts. This includes: + +* A massive national daily survey we’re running in partnership with Facebook. Over 20 million Americans have answered the survey since April 2020, providing real-time insights into, e.g., self-reported symptoms, mask wearing, testing, and contacts, all broken down by various demographics. +* An enormous database of medical insurance claims that have been de-identified in accordance with HIPAA privacy regulations, covering more than half the US population, made possible through health system partners including Change Healthcare. We use this to produce a new syndromic COVID-19 indicator based on doctor visits, and other indicators based on hospitalizations and ICU admissions. + +We have selected a small number of indicators to showcase in COVIDcast, a visualization system that helps place pandemic activity in geographic and temporal context. It includes a notion of correlation across time, for example, a spike in cases is often followed by a spike in hospital admissions some number of days later. diff --git a/content/flu/_index.md b/content/flu/_index.md index 74857acf8..693837741 100644 --- a/content/flu/_index.md +++ b/content/flu/_index.md @@ -1,6 +1,6 @@ --- -title: Flu +title: Flu and Other Pathogens layout: single --- -TODO \ No newline at end of file +Delphi systems developed before the pandemic typically target seasonal Influenza ("Flu"), but often are used to study other diseases including Chikungunya, Dengue, and Norovirus. From f750c24357e07112395118b800b1b9d6691562ed Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Tue, 8 Jun 2021 17:27:48 +0200 Subject: [PATCH 07/19] refactor: remove old release log of covidcast --- content/covidcast/release-log/_index.md | 6 --- .../covidcast/release-log/headless/index.md | 4 -- .../covidcast/release-log/headless/v1.0.md | 7 --- .../covidcast/release-log/headless/v1.1.md | 10 ---- .../covidcast/release-log/headless/v1.10.0.md | 35 ------------- .../covidcast/release-log/headless/v1.11.0.md | 51 ------------------- .../covidcast/release-log/headless/v1.11.1.md | 9 ---- .../covidcast/release-log/headless/v1.12.0.md | 27 ---------- .../covidcast/release-log/headless/v1.12.1.md | 10 ---- .../covidcast/release-log/headless/v1.12.2.md | 18 ------- .../covidcast/release-log/headless/v1.12.3.md | 17 ------- .../covidcast/release-log/headless/v1.12.4.md | 14 ----- .../covidcast/release-log/headless/v1.2.1.md | 6 --- .../covidcast/release-log/headless/v1.2.md | 9 ---- .../covidcast/release-log/headless/v1.3.md | 10 ---- .../covidcast/release-log/headless/v1.4.1.md | 7 --- .../covidcast/release-log/headless/v1.4.md | 11 ---- .../covidcast/release-log/headless/v1.5.md | 8 --- .../covidcast/release-log/headless/v1.6.md | 9 ---- .../covidcast/release-log/headless/v1.7.md | 10 ---- .../covidcast/release-log/headless/v1.8.md | 12 ----- .../covidcast/release-log/headless/v1.9.2.md | 6 --- .../covidcast/release-log/headless/v1.9.3.md | 6 --- .../covidcast/release-log/headless/v1.9.md | 10 ---- .../covidcast/release-log/headless/v2.0.0.md | 15 ------ .../covidcast/release-log/headless/v2.0.1.md | 10 ---- .../covidcast/release-log/headless/v2.1.0.md | 10 ---- .../covidcast/release-log/headless/v2.2.0.md | 10 ---- .../covidcast/release-log/headless/v2.3.0.md | 13 ----- .../covidcast/release-log/headless/v2.4.0.md | 15 ------ .../delphi/layouts/shortcodes/releaselog.html | 13 ----- 31 files changed, 398 deletions(-) delete mode 100644 content/covidcast/release-log/_index.md delete mode 100644 content/covidcast/release-log/headless/index.md delete mode 100644 content/covidcast/release-log/headless/v1.0.md delete mode 100644 content/covidcast/release-log/headless/v1.1.md delete mode 100644 content/covidcast/release-log/headless/v1.10.0.md delete mode 100644 content/covidcast/release-log/headless/v1.11.0.md delete mode 100644 content/covidcast/release-log/headless/v1.11.1.md delete mode 100644 content/covidcast/release-log/headless/v1.12.0.md delete mode 100644 content/covidcast/release-log/headless/v1.12.1.md delete mode 100644 content/covidcast/release-log/headless/v1.12.2.md delete mode 100644 content/covidcast/release-log/headless/v1.12.3.md delete mode 100644 content/covidcast/release-log/headless/v1.12.4.md delete mode 100644 content/covidcast/release-log/headless/v1.2.1.md delete mode 100644 content/covidcast/release-log/headless/v1.2.md delete mode 100644 content/covidcast/release-log/headless/v1.3.md delete mode 100644 content/covidcast/release-log/headless/v1.4.1.md delete mode 100644 content/covidcast/release-log/headless/v1.4.md delete mode 100644 content/covidcast/release-log/headless/v1.5.md delete mode 100644 content/covidcast/release-log/headless/v1.6.md delete mode 100644 content/covidcast/release-log/headless/v1.7.md delete mode 100644 content/covidcast/release-log/headless/v1.8.md delete mode 100644 content/covidcast/release-log/headless/v1.9.2.md delete mode 100644 content/covidcast/release-log/headless/v1.9.3.md delete mode 100644 content/covidcast/release-log/headless/v1.9.md delete mode 100644 content/covidcast/release-log/headless/v2.0.0.md delete mode 100644 content/covidcast/release-log/headless/v2.0.1.md delete mode 100644 content/covidcast/release-log/headless/v2.1.0.md delete mode 100644 content/covidcast/release-log/headless/v2.2.0.md delete mode 100644 content/covidcast/release-log/headless/v2.3.0.md delete mode 100644 content/covidcast/release-log/headless/v2.4.0.md delete mode 100644 themes/delphi/layouts/shortcodes/releaselog.html diff --git a/content/covidcast/release-log/_index.md b/content/covidcast/release-log/_index.md deleted file mode 100644 index 49bc629bc..000000000 --- a/content/covidcast/release-log/_index.md +++ /dev/null @@ -1,6 +0,0 @@ ---- -title: Release Log -layout: single ---- - -{{}} diff --git a/content/covidcast/release-log/headless/index.md b/content/covidcast/release-log/headless/index.md deleted file mode 100644 index 441ef3a5a..000000000 --- a/content/covidcast/release-log/headless/index.md +++ /dev/null @@ -1,4 +0,0 @@ ---- -# flag to disable rendering individual pages -headless: true ---- diff --git a/content/covidcast/release-log/headless/v1.0.md b/content/covidcast/release-log/headless/v1.0.md deleted file mode 100644 index 717b195d6..000000000 --- a/content/covidcast/release-log/headless/v1.0.md +++ /dev/null @@ -1,7 +0,0 @@ ---- -title: v1.0 -date: 2020-04-24 ---- - -- Initial public release of COVIDcast. -- Includes maps of Doctor Visits, Facebook and Google surveys, Google search trends, and Quidel flu testing. diff --git a/content/covidcast/release-log/headless/v1.1.md b/content/covidcast/release-log/headless/v1.1.md deleted file mode 100644 index bab731ab5..000000000 --- a/content/covidcast/release-log/headless/v1.1.md +++ /dev/null @@ -1,10 +0,0 @@ ---- -title: v1.1 -date: 2020-05-07 ---- - -- Time series plots now include shaded regions showing the standard error of the signal estimates, when available. -- New map: The “Deaths (JHU)” map shows death ratios (deaths per 100,000 population) due to COVID-19 per day. This reflects official figures from state and local health authorities, [as compiled by a team at Johns Hopkins University](https://systems.jhu.edu/research/public-health/ncov/). -- New map: The “Confirmed Cases (JHU)” map shows confirmed case ratios (cases per 100,000 population) of COVID-19 per day. This reflects official figures reporting cases confirmed by testing to be COVID-19, [as compiled by a team at Johns Hopkins University](https://systems.jhu.edu/research/public-health/ncov/). -- The “Flu Testing (Quidel)” map is no longer shown. During flu season, rates of flu tests may have correlated with rates of COVID-like illnesses, as many doctors who suspected COVID-19 conducted flu tests to rule out influenza. However, the end of flu season means few flu tests are currently conducted. -- Previously, the “Search Trends (Google)” signal reported search volume on each day on the map for the following day; for example, search volume on April 16 would be mapped as occurring on April 17. This is no longer done. diff --git a/content/covidcast/release-log/headless/v1.10.0.md b/content/covidcast/release-log/headless/v1.10.0.md deleted file mode 100644 index 9d1afc99a..000000000 --- a/content/covidcast/release-log/headless/v1.10.0.md +++ /dev/null @@ -1,35 +0,0 @@ ---- -title: v1.10.0 -date: 2020-10-28 ---- - -#### New Features - -- [#546](https://github.com/cmu-delphi/www-covidcast/pull/546) New tab Single location view - -#### Minor Features - -- [#552](https://github.com/cmu-delphi/www-covidcast/pull/552) Use local maxima for top 10 -- [#558](https://github.com/cmu-delphi/www-covidcast/pull/558) Update population data based on indicator data -- [#530](https://github.com/cmu-delphi/www-covidcast/pull/530) Generate signal constants from a document -- [#571](https://github.com/cmu-delphi/www-covidcast/pull/571) Making toggle selection darker to indicate selected status -- [#574](https://github.com/cmu-delphi/www-covidcast/pull/574) Add day ticks and week gridlines for Detail view -- [#524](https://github.com/cmu-delphi/www-covidcast/pull/524) Re-enable side panel toggle -- [#525](https://github.com/cmu-delphi/www-covidcast/pull/525) Search icon and na hint -- [#526](https://github.com/cmu-delphi/www-covidcast/pull/526) Add background to map title for visibility -- [#542](https://github.com/cmu-delphi/www-covidcast/pull/542) Tune export data tab -- [#544](https://github.com/cmu-delphi/www-covidcast/pull/544) Add signal coverage info -- [#545](https://github.com/cmu-delphi/www-covidcast/pull/545) Add date shortcuts to "Displaying" bar -- [#568](https://github.com/cmu-delphi/www-covidcast/pull/568) Detail view UI improvements (add ticks / improve timeline dragger) -- [#556](https://github.com/cmu-delphi/www-covidcast/pull/556) Add download button to detail views -- [#551](https://github.com/cmu-delphi/www-covidcast/pull/551) Improve bubble view in areas with no data (enforce 0 is no bubble) -- [#548](https://github.com/cmu-delphi/www-covidcast/pull/548) Change max mobile width for mode nav buttons - -#### Bug-fixes - -- [#523](https://github.com/cmu-delphi/www-covidcast/pull/523) Incorporate hotfixes for 1.9.x series -- [#566](https://github.com/cmu-delphi/www-covidcast/pull/566) Improve vega highlight performance -- [#541](https://github.com/cmu-delphi/www-covidcast/pull/541) Accessibility: Add aria label to map -- [#460](https://github.com/cmu-delphi/www-covidcast/pull/460) Add missing county level to quidel -- [#535](https://github.com/cmu-delphi/www-covidcast/pull/535) Incomplete imputation in detail view -- [#514](https://github.com/cmu-delphi/www-covidcast/pull/514) Accessibility: set aria option for no-uislider diff --git a/content/covidcast/release-log/headless/v1.11.0.md b/content/covidcast/release-log/headless/v1.11.0.md deleted file mode 100644 index 3a6b27827..000000000 --- a/content/covidcast/release-log/headless/v1.11.0.md +++ /dev/null @@ -1,51 +0,0 @@ ---- -title: v1.11.0 -date: 2020-12-02 ---- - -This release changes COVIDcast from a complete site to an embedded component, primarily to the [www-main](https://github.com/cmu-delphi/www-covidcast) repository, which serves the Delphi homepage. This means that instead of having both covidcast.cmu.edu and delphi.cmu.edu separately, we will now have delphi.cmu.edu and covidcast will live at delphi.cmu.edu/covidcast. - -The are only minor changes to the COVIDcast visualization itself, which was why this is marked as 1.11.0 instead of 2.0. - -#### Signal Changes - -- "COVID Searches on Google" is now "COVID Symptom Searches on Google". For more details see: [`google-symptoms` `sum_anosmia_ageusia_smoothed_search`](https://cmu-delphi.github.io/delphi-epidata/api/covidcast-signals/google-symptoms.html) signal. -- New "Bar Visits" signal from Safegraph. For more details see: [`safegraph` `bars_visit_num` and `bars_visit_prop`](https://cmu-delphi.github.io/delphi-epidata/api/covidcast-signals/safegraph.html#safegraph-weekly-patterns). -- New "Restaurant Visits" signal from Safegraph. For more details see: [`safegraph` `restaurants_visit_num` and `restaurants_visit_prop`](https://cmu-delphi.github.io/delphi-epidata/api/covidcast-signals/safegraph.html#safegraph-weekly-patterns) -- "Away from home" signals replaced by smoothed versions to remove the weekend effect. For more details see: [`safegraph` `full_time_work_prop_7dav` and `part_time_work_prop_7dav`](https://cmu-delphi.github.io/delphi-epidata/api/covidcast-signals/safegraph.html#safegraph-social-distancing-metrics) - -#### New features - -- [#610](https://github.com/cmu-delphi/www-covidcast/pull/610) (re: [#593](https://github.com/cmu-delphi/www-covidcast/issues/593)) Hospital referal regions now available as a geo type -- [#636](https://github.com/cmu-delphi/www-covidcast/pull/636) (re: [#631](https://github.com/cmu-delphi/www-covidcast/issues/631)) Change to embedded version - -#### Improvements - -- [#629](https://github.com/cmu-delphi/www-covidcast/pull/629) (re: [#599](https://github.com/cmu-delphi/www-covidcast/issues/599)) Additional export infos -- [#650](https://github.com/cmu-delphi/www-covidcast/pull/650) (re: [#649](https://github.com/cmu-delphi/www-covidcast/issues/649)) Research disclaimer -- [#628](https://github.com/cmu-delphi/www-covidcast/pull/628) (re: [#624](https://github.com/cmu-delphi/www-covidcast/issues/624)) Limit add another to same geo level -- [#630](https://github.com/cmu-delphi/www-covidcast/pull/630) (re: [#598](https://github.com/cmu-delphi/www-covidcast/issues/598)) Restore focus upon dialog close -- [#587](https://github.com/cmu-delphi/www-covidcast/pull/587) (re: [#460](https://github.com/cmu-delphi/www-covidcast/issues/460), and others) Generate changelog from PRs -- [#653](https://github.com/cmu-delphi/www-covidcast/pull/653) More robust missing meta data handling -- [#633](https://github.com/cmu-delphi/www-covidcast/pull/633) (re: [#625](https://github.com/cmu-delphi/www-covidcast/issues/625)) Improve detail view (axis) labels -- [#641](https://github.com/cmu-delphi/www-covidcast/pull/641) (re: [#623](https://github.com/cmu-delphi/www-covidcast/issues/623)) Preserve modified date range while DetailView is displayed. -- [#575](https://github.com/cmu-delphi/www-covidcast/pull/575) (re: [#569](https://github.com/cmu-delphi/www-covidcast/issues/569)) Improve whitespace for small multiples -- [#588](https://github.com/cmu-delphi/www-covidcast/pull/588) (re: [#586](https://github.com/cmu-delphi/www-covidcast/issues/586)) Improve hover behavior on charts -- [#614](https://github.com/cmu-delphi/www-covidcast/pull/614) (re: [#589](https://github.com/cmu-delphi/www-covidcast/issues/589)) Render line chart with clipped regions. -- [#454](https://github.com/cmu-delphi/www-covidcast/pull/454) Create staging environment setup -- [#604](https://github.com/cmu-delphi/www-covidcast/pull/604) Add testing environment -- [#591](https://github.com/cmu-delphi/www-covidcast/pull/591) Improve vega tooltip styling -- [#585](https://github.com/cmu-delphi/www-covidcast/pull/585) (re: [#582](https://github.com/cmu-delphi/www-covidcast/issues/582)) Possible fix for single region vega -- [#573](https://github.com/cmu-delphi/www-covidcast/pull/573) (re: [#484](https://github.com/cmu-delphi/www-covidcast/issues/484)) Improve chart headers and layout - -#### Bug-fixes - -- [#635](https://github.com/cmu-delphi/www-covidcast/pull/635) Date range initial selection was lost -- [#605](https://github.com/cmu-delphi/www-covidcast/pull/605) (re: [#602](https://github.com/cmu-delphi/www-covidcast/issues/602), [#603](https://github.com/cmu-delphi/www-covidcast/issues/603)) County name generation -- [#652](https://github.com/cmu-delphi/www-covidcast/pull/652) (re: [#637](https://github.com/cmu-delphi/www-covidcast/issues/637)) Reduce layout flicker on Region Details -- [#654](https://github.com/cmu-delphi/www-covidcast/pull/654) Style: fix some of the most obvious uikit bugs -- [#643](https://github.com/cmu-delphi/www-covidcast/pull/643) (re: [#586](https://github.com/cmu-delphi/www-covidcast/issues/586)) Avoid flickering tooltips on small multiples -- [#638](https://github.com/cmu-delphi/www-covidcast/pull/638) Bugfix: detecting proper death signal -- [#617](https://github.com/cmu-delphi/www-covidcast/pull/617) (re: [#615](https://github.com/cmu-delphi/www-covidcast/issues/615)) Use correct field when computing max of values. -- [#613](https://github.com/cmu-delphi/www-covidcast/pull/613) (re: [#611](https://github.com/cmu-delphi/www-covidcast/issues/611)) Fix tooltip for calendar option -- [#608](https://github.com/cmu-delphi/www-covidcast/pull/608) (re: [#607](https://github.com/cmu-delphi/www-covidcast/issues/607)) Fix mouseout and mouseover flickers diff --git a/content/covidcast/release-log/headless/v1.11.1.md b/content/covidcast/release-log/headless/v1.11.1.md deleted file mode 100644 index e5e1dc00a..000000000 --- a/content/covidcast/release-log/headless/v1.11.1.md +++ /dev/null @@ -1,9 +0,0 @@ ---- -title: v1.11.1 -date: 2020-12-11 ---- - -#### Signal Changes - -* Removed "COVID Symptom Searches on Google" signal. -* Replaced "COVID-Related Doctor Visits" with new signal from Change Healthcare. For more details see: [`chng`:`smoothed_outpatient_cli`](https://cmu-delphi.github.io/delphi-epidata/api/covidcast-signals/chng.html) diff --git a/content/covidcast/release-log/headless/v1.12.0.md b/content/covidcast/release-log/headless/v1.12.0.md deleted file mode 100644 index 1b26f63b0..000000000 --- a/content/covidcast/release-log/headless/v1.12.0.md +++ /dev/null @@ -1,27 +0,0 @@ ---- -title: v1.12.0 -date: 2020-12-23 ---- - -This release introduces the new National COVID Survey Dashboard showing aggregated survey results. In addition, the overall style of COVIDcast has been adapted to the new website. - -#### New Features - -- [#600](https://github.com/cmu-delphi/www-covidcast/pull/600) National COVID Survey Dashboard -- [#688](https://github.com/cmu-delphi/www-covidcast/pull/688) (re: [#536](https://github.com/cmu-delphi/www-covidcast/issues/536)) Default ratio cases/deaths -- [#616](https://github.com/cmu-delphi/www-covidcast/pull/616), [#678](https://github.com/cmu-delphi/www-covidcast/pull/678) UIKit Adaptations -- [#692](https://github.com/cmu-delphi/www-covidcast/pull/692), [#671](https://github.com/cmu-delphi/www-covidcast/pull/671) (re: [#651](https://github.com/cmu-delphi/www-covidcast/issues/651)) Simplify URL parameters -- [#677](https://github.com/cmu-delphi/www-covidcast/pull/677) (re: [#632](https://github.com/cmu-delphi/www-covidcast/issues/632)) Compute mega counties (`Rest of ...`) population on the fly -- [#658](https://github.com/cmu-delphi/www-covidcast/pull/658) (re: [#485](https://github.com/cmu-delphi/www-covidcast/issues/485), [#639](https://github.com/cmu-delphi/www-covidcast/issues/639)) Additional export options - -#### Improvements - -- [#689](https://github.com/cmu-delphi/www-covidcast/pull/689) (re: [#687](https://github.com/cmu-delphi/www-covidcast/issues/687)) Change date shortcuts -- [#676](https://github.com/cmu-delphi/www-covidcast/pull/676) Improve Map Selection UX -- [#659](https://github.com/cmu-delphi/www-covidcast/pull/659) (re: [#656](https://github.com/cmu-delphi/www-covidcast/issues/656)) Shrink card header font size, adjust spacing. - -#### Bug-fixes - -- [#690](https://github.com/cmu-delphi/www-covidcast/pull/690) (re: [#686](https://github.com/cmu-delphi/www-covidcast/issues/686)) Add special case for old safari -- [#674](https://github.com/cmu-delphi/www-covidcast/pull/674) Refactor: use vega resize method -- [#666](https://github.com/cmu-delphi/www-covidcast/pull/666) (re: [#664](https://github.com/cmu-delphi/www-covidcast/issues/664), [#665](https://github.com/cmu-delphi/www-covidcast/issues/665)) Add HRR Population data and fix Orlando bug \ No newline at end of file diff --git a/content/covidcast/release-log/headless/v1.12.1.md b/content/covidcast/release-log/headless/v1.12.1.md deleted file mode 100644 index 493d5cf5c..000000000 --- a/content/covidcast/release-log/headless/v1.12.1.md +++ /dev/null @@ -1,10 +0,0 @@ ---- -title: v1.12.1 -date: 2020-12-29 ---- - -Bugfix release for improved mobile experience - -#### Improvements - -- [#700](https://github.com/cmu-delphi/www-covidcast/pull/700) Improve mobile experience diff --git a/content/covidcast/release-log/headless/v1.12.2.md b/content/covidcast/release-log/headless/v1.12.2.md deleted file mode 100644 index 3ec73ce67..000000000 --- a/content/covidcast/release-log/headless/v1.12.2.md +++ /dev/null @@ -1,18 +0,0 @@ ---- -title: v1.12.2 -date: 2021-01-04 ---- - -Bugfix release for changed signal - -#### Signal Changes - -- Reverted "COVID-Related Doctor Visits" signal - -#### Bug-fixes - -- [#703](https://github.com/cmu-delphi/www-covidcast/pull/703) rename COVIDCast to COVIDcast - -#### Others - -- [#704](https://github.com/cmu-delphi/www-covidcast/pull/704) Unique bundle names diff --git a/content/covidcast/release-log/headless/v1.12.3.md b/content/covidcast/release-log/headless/v1.12.3.md deleted file mode 100644 index 64258fa1b..000000000 --- a/content/covidcast/release-log/headless/v1.12.3.md +++ /dev/null @@ -1,17 +0,0 @@ ---- -title: v1.12.3 -date: 2021-01-12 ---- - -#### Signal Changes - -- Add "Vaccine Acceptance" signal to map and survey dashboard - -#### New Features - -- [#709](https://github.com/cmu-delphi/www-covidcast/pull/709), [#710](https://github.com/cmu-delphi/www-covidcast/pull/710), [#708](https://github.com/cmu-delphi/www-covidcast/pull/708) Improve loading performance especially for the survey dashboard -- [#712](https://github.com/cmu-delphi/www-covidcast/pull/712) Improve map style - -#### Bug-fixes - -- [#713](https://github.com/cmu-delphi/www-covidcast/pull/713) fix trend color for decreasing trends diff --git a/content/covidcast/release-log/headless/v1.12.4.md b/content/covidcast/release-log/headless/v1.12.4.md deleted file mode 100644 index 7ed26a873..000000000 --- a/content/covidcast/release-log/headless/v1.12.4.md +++ /dev/null @@ -1,14 +0,0 @@ ---- -title: v1.12.4 -date: 2021-01-19 ---- - -This release improves the UX of the survey dashboard for both desktop and mobile experience. - -#### New Features - -- [#724](https://github.com/cmu-delphi/www-covidcast/pull/724), [#717](https://github.com/cmu-delphi/www-covidcast/pull/717) Survey dashboards improvements - -#### Bug-fixes - -- [#719](https://github.com/cmu-delphi/www-covidcast/pull/719) (re: [#718](https://github.com/cmu-delphi/www-covidcast/issues/718)) fix Export Data bug diff --git a/content/covidcast/release-log/headless/v1.2.1.md b/content/covidcast/release-log/headless/v1.2.1.md deleted file mode 100644 index 23f6c84be..000000000 --- a/content/covidcast/release-log/headless/v1.2.1.md +++ /dev/null @@ -1,6 +0,0 @@ ---- -title: v1.2.1 -date: 2020-05-28 ---- - -- The “Combined” map has been updated to include the "Symptoms in Community (Facebook)" indicator. diff --git a/content/covidcast/release-log/headless/v1.2.md b/content/covidcast/release-log/headless/v1.2.md deleted file mode 100644 index 4d2259fbb..000000000 --- a/content/covidcast/release-log/headless/v1.2.md +++ /dev/null @@ -1,9 +0,0 @@ ---- -title: v1.2 -date: 2020-05-20 ---- - -- New map: The “Combined” signal represents a statistical combination of the other indicators, not including the official reports (cases and deaths). For more information how this indicator is calculated, see the details above in the list of indicators. -- New map: The “Symptoms in Community (Facebook)” map shows the estimated fraction of people who know someone with a COVID-like illness in their local community. -- The “Surveys (Facebook)” map has been renamed “Symptoms (Facebook)”, to reflect that it asks respondents whether people in their household have COVID-like symptoms. -- The “Surveys (Google)” map has been removed. This data is still available in the public Epidata API, but new data will not be collected. diff --git a/content/covidcast/release-log/headless/v1.3.md b/content/covidcast/release-log/headless/v1.3.md deleted file mode 100644 index 4b1e6c68f..000000000 --- a/content/covidcast/release-log/headless/v1.3.md +++ /dev/null @@ -1,10 +0,0 @@ ---- -title: v1.3 -date: 2020-06-10 ---- - -- The COVIDcast map now includes Puerto Rico. Not all data sources are available for Puerto Rico, but data will be displayed when available. -- The “Combined” signal now includes standard error bands when viewing the time series plot for a specific geographical area, representing the estimated uncertainty in this signal. This uncertainty comes because the signal is a combination of the other signals which are based on survey estimates or other estimates with margins of error. -- Tooltips for the official Cases and Deaths signals have been updated to contain the population, raw count, and count per 100,000 people, to help distinguish sparsely-populated areas with one or two cases from dense urban areas with more total cases but an apparently lower rate per 100,000 people. -- Fixed a bug that inflated the color value for per capita Cases and Deaths relative to the legend. -- Other small bug fixes and improvements in the COVIDcast map. diff --git a/content/covidcast/release-log/headless/v1.4.1.md b/content/covidcast/release-log/headless/v1.4.1.md deleted file mode 100644 index b41d9310b..000000000 --- a/content/covidcast/release-log/headless/v1.4.1.md +++ /dev/null @@ -1,7 +0,0 @@ ---- -title: v1.4.1 -date: 2020-07-01 ---- - -- New map: The “Hospital Admissions” map indicates the proportion of daily hospital admissions with COVID-related diagnoses, based on data from health system partners. -- Minor bug and layout fixes. diff --git a/content/covidcast/release-log/headless/v1.4.md b/content/covidcast/release-log/headless/v1.4.md deleted file mode 100644 index 91090d262..000000000 --- a/content/covidcast/release-log/headless/v1.4.md +++ /dev/null @@ -1,11 +0,0 @@ ---- -title: v1.4 -date: 2020-06-24 ---- - -- Map controls have been revised to more easily select indicators and geographic areas. -- A new search bar makes it possible to quickly find any county or city of interest. -- The color scale for increasing and decreasing 7-day trends has been updated to more clearly highlight trends. -- New maps: The “Away from home” maps use mobile device location data from SafeGraph to estimate the proportion of people spending time outside their homes each day, for either 3-6 hours or more than 6 hours. -- Map color scales on the cases and deaths maps are now logarithmic, making it easier to see differences among regions with both low rates and high rates. -- Cases and deaths maps are now based on 7-day averages, rather than reporting figures for a single day. diff --git a/content/covidcast/release-log/headless/v1.5.md b/content/covidcast/release-log/headless/v1.5.md deleted file mode 100644 index e1dfa4c6b..000000000 --- a/content/covidcast/release-log/headless/v1.5.md +++ /dev/null @@ -1,8 +0,0 @@ ---- -title: v1.5 -date: 2020-07-08 ---- - -- The map layout has been redesigned to prevent the controls from obscuring the map. -- Updated maps: The cases and deaths maps now use data from both Johns Hopkins University and USAFacts. Data from Johns Hopkins University is used for Puerto Rico, while USAFacts is used everywhere else. -- Numerous minor bug fixes. diff --git a/content/covidcast/release-log/headless/v1.6.md b/content/covidcast/release-log/headless/v1.6.md deleted file mode 100644 index 822db4041..000000000 --- a/content/covidcast/release-log/headless/v1.6.md +++ /dev/null @@ -1,9 +0,0 @@ ---- -title: v1.6 -date: 2020-07-22 ---- - -- Bubble maps have been added as an option to visualize cases and deaths. -- A calendar date-picker lets the user select any date to display on the map. -- The 7-day Trend display is temporarily unavailable while technical problems are resolved. It will be re-enabled in a future release. -- Numerous minor bug fixes. diff --git a/content/covidcast/release-log/headless/v1.7.md b/content/covidcast/release-log/headless/v1.7.md deleted file mode 100644 index d225b9e4b..000000000 --- a/content/covidcast/release-log/headless/v1.7.md +++ /dev/null @@ -1,10 +0,0 @@ ---- -title: v1.7 -date: 2020-08-12 ---- - -- New map: The "COVID-19 Antigen Tests" map indicates the percentage of COVID-19 antigen tests that have come back positive, based on data from Quidel, Inc. -- Spike maps have been added as an option to visualize case and death indicators, along with bubble maps. -- The design of the COVIDcast home page has been improved to include navigation to other parts of the site and to other Delphi web pages. -- Layout improvements to improve the site’s usability on mobile devices. -- Numerous minor bug fixes. diff --git a/content/covidcast/release-log/headless/v1.8.md b/content/covidcast/release-log/headless/v1.8.md deleted file mode 100644 index 86b73de56..000000000 --- a/content/covidcast/release-log/headless/v1.8.md +++ /dev/null @@ -1,12 +0,0 @@ ---- -title: v1.8 -date: 2020-09-09 ---- - -- Small multiples of all indicators in a right-side panel, when you select a location. -- More advanced time series charts, including zooming, when you expand an indicator. -- Improved time-lapse mode that plays animations over time more smoothly. -- Toggles for Incidence/Cumulative and Counts/Ratios for Cases and Deaths indicators. -- Improved speed of loading COVIDcast map. -- Improved mobile support. -- Numerous minor bug fixes. diff --git a/content/covidcast/release-log/headless/v1.9.2.md b/content/covidcast/release-log/headless/v1.9.2.md deleted file mode 100644 index 47e3a2d50..000000000 --- a/content/covidcast/release-log/headless/v1.9.2.md +++ /dev/null @@ -1,6 +0,0 @@ ---- -title: v1.9.2 -date: 2020-10-06 ---- - -- Switched the signal displayed for Hospital Admissions from one that includes both medical claims and electronic medical records to one that only includes claims data. diff --git a/content/covidcast/release-log/headless/v1.9.3.md b/content/covidcast/release-log/headless/v1.9.3.md deleted file mode 100644 index c8eea4acb..000000000 --- a/content/covidcast/release-log/headless/v1.9.3.md +++ /dev/null @@ -1,6 +0,0 @@ ---- -title: v1.9.3 -date: 2020-10-09 ---- - -- Added the People Wearing Masks signal diff --git a/content/covidcast/release-log/headless/v1.9.md b/content/covidcast/release-log/headless/v1.9.md deleted file mode 100644 index b3519957c..000000000 --- a/content/covidcast/release-log/headless/v1.9.md +++ /dev/null @@ -1,10 +0,0 @@ ---- -title: v1.9 -date: 2020-09-30 ---- - -- Top 10 view -- Comparisons mode to compare indicators between multiple locations (bottom right) -- Spikes and bubble maps enabled for all signals -- Export Data tab -- Signal descriptions provided as “?” popup for all signals diff --git a/content/covidcast/release-log/headless/v2.0.0.md b/content/covidcast/release-log/headless/v2.0.0.md deleted file mode 100644 index 708333c56..000000000 --- a/content/covidcast/release-log/headless/v2.0.0.md +++ /dev/null @@ -1,15 +0,0 @@ ---- -title: v2.0.0 -date: 2021-03-19 ---- - -### Signal Changes - -- Replace "Vaccine Acceptance" with signal including both already received the vaccine and definitely or probably choose to get vaccinated. -- Change "People Wearing Masks" signal to its latest revision -- Add "COVID Symptom Searches on Google" signal to map and COVIDcast 2.0 -- Change survey result signals to their latest revisions with the option to explore old revisions - -### New Features - -This release introduces the new mobile-first based COVIDcast website with a fresh new design. diff --git a/content/covidcast/release-log/headless/v2.0.1.md b/content/covidcast/release-log/headless/v2.0.1.md deleted file mode 100644 index 638613ec1..000000000 --- a/content/covidcast/release-log/headless/v2.0.1.md +++ /dev/null @@ -1,10 +0,0 @@ ---- -title: v2.0.1 -date: 2021-03-22 ---- - -Bug-fix release - -### Bug-fixes - -- [#848](https://github.com/cmu-delphi/www-covidcast/pull/848) (re: [#845](https://github.com/cmu-delphi/www-covidcast/issues/845), [#846](https://github.com/cmu-delphi/www-covidcast/issues/846), [#847](https://github.com/cmu-delphi/www-covidcast/issues/847)) Reset highlight region in line chart diff --git a/content/covidcast/release-log/headless/v2.1.0.md b/content/covidcast/release-log/headless/v2.1.0.md deleted file mode 100644 index 004d064db..000000000 --- a/content/covidcast/release-log/headless/v2.1.0.md +++ /dev/null @@ -1,10 +0,0 @@ ---- -title: v2.1.0 -date: 2021-03-26 ---- - -### New Features - * Annotation framework for adding hints about data anomalies on the fly - - -More information: https://github.com/cmu-delphi/www-covidcast/releases/tag/v2.1.0 \ No newline at end of file diff --git a/content/covidcast/release-log/headless/v2.2.0.md b/content/covidcast/release-log/headless/v2.2.0.md deleted file mode 100644 index 3b1d30e8f..000000000 --- a/content/covidcast/release-log/headless/v2.2.0.md +++ /dev/null @@ -1,10 +0,0 @@ ---- -title: v2.2.0 -date: 2021-04-01 ---- - -### New Features - * Indicator Status Overview dashboard: Explore the status of API indicators and their coverages - - -More information: https://github.com/cmu-delphi/www-covidcast/releases/tag/v2.2.0 \ No newline at end of file diff --git a/content/covidcast/release-log/headless/v2.3.0.md b/content/covidcast/release-log/headless/v2.3.0.md deleted file mode 100644 index b8087c7f6..000000000 --- a/content/covidcast/release-log/headless/v2.3.0.md +++ /dev/null @@ -1,13 +0,0 @@ ---- -title: v2.3.0 -date: 2021-04-15 ---- - -### New Features - * Explore Correlations: Explore correlations between different indicators - * Annotation Overview: Show all data anomalies recorded in COVIDcast in a central place - * Expandable Line Charts: Expand the line chart of indicators to show the full historic range - * HHS and Nation Support: The classic map now supports displaying HHS region and national level data - - -More information: https://github.com/cmu-delphi/www-covidcast/releases/tag/v2.3.0 diff --git a/content/covidcast/release-log/headless/v2.4.0.md b/content/covidcast/release-log/headless/v2.4.0.md deleted file mode 100644 index 259c83c27..000000000 --- a/content/covidcast/release-log/headless/v2.4.0.md +++ /dev/null @@ -1,15 +0,0 @@ ---- -title: v2.4.0 -date: 2021-05-03 ---- - -### Signal Changes - * Remove "At Away Location 6hr+" and "At Away Location 3-6hr" since the underlying data is not longer available - * Add "In-Person Schooling" to survey dashboard - -### New Features - * add hint about data freshness - * add warnings about common missing data - - -More information: https://github.com/cmu-delphi/www-covidcast/releases/tag/v2.4.0 diff --git a/themes/delphi/layouts/shortcodes/releaselog.html b/themes/delphi/layouts/shortcodes/releaselog.html deleted file mode 100644 index 9f3fb5f10..000000000 --- a/themes/delphi/layouts/shortcodes/releaselog.html +++ /dev/null @@ -1,13 +0,0 @@ -{{ $tools := .Site.GetPage "/covidcast/release-log/headless" }} - From 21816d53f94fb166a158617051dd00b709ac00e3 Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Fri, 11 Jun 2021 18:53:46 +0200 Subject: [PATCH 08/19] style: fix width for large sub menu --- themes/delphi/assets/css/layout/_header_footer.scss | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/themes/delphi/assets/css/layout/_header_footer.scss b/themes/delphi/assets/css/layout/_header_footer.scss index 8fc7c4605..8ff4fd490 100644 --- a/themes/delphi/assets/css/layout/_header_footer.scss +++ b/themes/delphi/assets/css/layout/_header_footer.scss @@ -38,7 +38,7 @@ $mobile-margin: 15px; } .uk-navbar-dropdown { - width: 250px; + width: 300px; } } From dbc1a90ae63daa6b1396de4924912c69cc0becbf Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Thu, 24 Jun 2021 09:01:54 +0200 Subject: [PATCH 09/19] feat: rename page title --- content/covid19/_index.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/covid19/_index.md b/content/covid19/_index.md index ebfceacbb..6c38d1e5e 100644 --- a/content/covid19/_index.md +++ b/content/covid19/_index.md @@ -1,5 +1,5 @@ --- -title: COVID-19 +title: Delphi's COVID-19 Response Team layout: single --- From ec43e1c84973a6d8830672d548accff9cc2863ce Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Thu, 1 Jul 2021 09:29:29 +0200 Subject: [PATCH 10/19] feat: add a basic archive page --- config.toml | 16 +++++----------- content/tools/archive.md | 14 ++++++++++++++ 2 files changed, 19 insertions(+), 11 deletions(-) create mode 100644 content/tools/archive.md diff --git a/config.toml b/config.toml index 0e6054116..37a574eb0 100644 --- a/config.toml +++ b/config.toml @@ -110,18 +110,12 @@ relativeURLs = false name = "Nowcast" url = "/nowcast/" weight = 10 -[[menu.main]] - identifier = "flu-crowdcast" - parent = "flu" - name = "Crowdcast" - url = "/crowdcast/" - weight = 20 [[menu.main]] identifier = "flu-fluscores" parent = "flu" name = "FluScores" url = "/misc/fluscores/" - weight = 30 + weight = 20 # tools [[menu.main]] @@ -167,13 +161,13 @@ relativeURLs = false weight = 60 [[menu.main]] parent = "tools" - name = "Crowdcast" - url = "/crowdcast/" + name = "FluScores" + url = "/misc/fluscores/" weight = 70 [[menu.main]] parent = "tools" - name = "FluScores" - url = "/misc/fluscores/" + name = "Archived Tools" + url = "/tools/archive/" weight = 80 diff --git a/content/tools/archive.md b/content/tools/archive.md new file mode 100644 index 000000000..3f2e96a00 --- /dev/null +++ b/content/tools/archive.md @@ -0,0 +1,14 @@ +--- +title: Archive +layout: single +--- + +TODO: List each archived tool, and include a date range when it was active + +## COVIDcast Classic Map + +[COVIDcast Classic]({{}}) + +## Crowdcast + +[Crowdcast](/crowdcast) From 4ca0c06bc792fbd497f00af08ec22ac0aae3a93b Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Thu, 1 Jul 2021 09:31:44 +0200 Subject: [PATCH 11/19] feat: apply new archive text --- content/tools/archive.md | 11 +++++------ 1 file changed, 5 insertions(+), 6 deletions(-) diff --git a/content/tools/archive.md b/content/tools/archive.md index 3f2e96a00..1a39567c3 100644 --- a/content/tools/archive.md +++ b/content/tools/archive.md @@ -1,14 +1,13 @@ --- -title: Archive +title: Archived Tools layout: single --- -TODO: List each archived tool, and include a date range when it was active -## COVIDcast Classic Map +### [COVIDcast 1.0 ("Classic")]({{}}) -[COVIDcast Classic]({{}}) +A map-first single-page webapp for visualizing COVID-19 pandemic indicators. -## Crowdcast +### [Crowdcast](/crowdcast) -[Crowdcast](/crowdcast) +Delphi’s "Wisdom of crowds" forecasting system: Used for Chikungunya, flu and most recently Covid. In it's archived configuration, this system is set up to forecast ILI during the COVID-19 pandemic From 35559aa23f8ea14e2c2b989d0c43d674c0732de3 Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Sun, 26 Sep 2021 20:36:47 -0400 Subject: [PATCH 12/19] refactor: change menu according to feedback --- config.toml | 79 +++++++++++------------------ content/about/publications/index.md | 2 +- content/covid19/_index.md | 2 +- content/covidcast/_index.md | 2 +- content/covidcast/survey-results.md | 4 +- content/tools/_index.md | 2 +- 6 files changed, 37 insertions(+), 54 deletions(-) diff --git a/config.toml b/config.toml index 4e9595364..c5c1ae89e 100644 --- a/config.toml +++ b/config.toml @@ -34,7 +34,7 @@ relativeURLs = false weight = 3 [[menu.main]] parent = "about" - name = "Research & White Papers" + name = "Research" url = "/about/publications" weight = 4 [[menu.main]] @@ -62,35 +62,35 @@ relativeURLs = false weight = 2 [[menu.main]] parent = "covid19" - name = "Delphi's COVID-19 Response Team" + name = "About COVIDcast" url = "/covid19/" weight = 1 +[[menu.main]] + parent = "covid19" + name = "About CTIS" + url = "/covidcast/surveys" + weight = 10 [[menu.main]] identifier = "covid19-covidcast" parent = "covid19" - name = "COVIDcast" + name = "COVIDcast Dashboard" url = "/covidcast/" weight = 20 [[menu.main]] parent = "covid19" - name = "Surveys" - url = "/covidcast/surveys" - weight = 10 -[[menu.main]] - parent = "covid19" - name = "CTIS Results Dashboard" + name = "CTIS Dashboard" url = "/covidcast/survey-results" - weight = 11 + weight = 30 [[menu.main]] parent = "covid19" name = "Export Data" url = "/covidcast/export" - weight = 30 + weight = 40 [[menu.main]] parent = "covid19" name = "Terms Of Use" url = "/covidcast/terms-of-use" - weight = 40 + weight = 50 # flu [[menu.main]] @@ -99,23 +99,6 @@ relativeURLs = false pre = "solid/disease" url = "/flu/" weight = 3 -[[menu.main]] - parent = "flu" - name = "Delphi Systems for Flu and Other Diseases" - url = "/flu/" - weight = 1 -[[menu.main]] - identifier = "flu-nowcast" - parent = "flu" - name = "Nowcast" - url = "/nowcast/" - weight = 10 -[[menu.main]] - identifier = "flu-fluscores" - parent = "flu" - name = "FluScores" - url = "/misc/fluscores/" - weight = 20 # tools [[menu.main]] @@ -126,44 +109,44 @@ relativeURLs = false weight = 5 [[menu.main]] parent = "tools" - name = "Delphi Tools" + name = "Tools Overview" url = "/tools/" weight = 1 [[menu.main]] parent = "tools" - name = "EpiVis" - url = "/epivis/" + name = "COVIDcast Dashboard" + url = "/covidcast/" weight = 10 [[menu.main]] parent = "tools" - name = "COVIDcast" - url = "/covidcast/" - weight = 20 + name = "COVIDcast R Package" + url = "https://cmu-delphi.github.io/covidcast/covidcastR/" + weight = 11 [[menu.main]] parent = "tools" - name = "Indicator Status Overview" + name = "COVIDcast Python Package" + url = "https://cmu-delphi.github.io/covidcast/covidcast-py/html/" + weight = 12 +[[menu.main]] + parent = "tools" + name = "Indicator Status" url = "/covidcast/indicator-status" - weight = 30 + weight = 20 [[menu.main]] parent = "tools" name = "Dashboard Builder" url = "/covidcast/dashboard" - weight = 40 + weight = 30 [[menu.main]] parent = "tools" name = "Forecast Evaluation" url = "/forecast-eval/" - weight = 50 -[[menu.main]] - parent = "tools" - name = "Nowcast" - url = "/nowcast/" - weight = 60 + weight = 40 [[menu.main]] parent = "tools" - name = "FluScores" - url = "/misc/fluscores/" - weight = 70 + name = "EpiVis" + url = "/epivis/" + weight = 50 [[menu.main]] parent = "tools" name = "Archived Tools" @@ -198,4 +181,4 @@ relativeURLs = false feedbackDelayMin = 45 # in sec feedbackDelayMax = 180 # in sec feedbackDuration = 60 # show it for 60sec - highlightLinks = "/covidcast/dashboard" + highlightLinks = "" diff --git a/content/about/publications/index.md b/content/about/publications/index.md index 93e776a11..6b13b6c28 100644 --- a/content/about/publications/index.md +++ b/content/about/publications/index.md @@ -1,5 +1,5 @@ --- -title: Research and White Papers +title: Research papers: - title: "Big data, big problems: Responding to \"Are we there yet?\"" image: response.jpg diff --git a/content/covid19/_index.md b/content/covid19/_index.md index 6c38d1e5e..2740b4bb9 100644 --- a/content/covid19/_index.md +++ b/content/covid19/_index.md @@ -1,5 +1,5 @@ --- -title: Delphi's COVID-19 Response Team +title: About COVIDcast layout: single --- diff --git a/content/covidcast/_index.md b/content/covidcast/_index.md index 3435d816d..b0f95dc14 100644 --- a/content/covidcast/_index.md +++ b/content/covidcast/_index.md @@ -1,5 +1,5 @@ --- -title: COVIDcast +title: CTIS Dashboard description: COVIDcast tracks and forecasts the spread of COVID-19. By Carnegie Mellon's Delphi Research Group. layout: covidcast_app app_mode: landing diff --git a/content/covidcast/survey-results.md b/content/covidcast/survey-results.md index f94a35ebd..4ac499fbd 100644 --- a/content/covidcast/survey-results.md +++ b/content/covidcast/survey-results.md @@ -1,6 +1,6 @@ --- -title: COVIDcast | Survey Results -linkTitle: Survey Results +title: COVIDcast | CTIS Dashboard +linkTitle: CTIS Dashboard description: | In collaboration with Facebook Data for Good, along with a consortium of universities and public health officials, the Delphi Group at Carnegie Mellon University conducts research surveys to monitor the spread and impact of the COVID-19 pandemic in the United States. This survey is advertised through Facebook. It has run continuously since early April 2020. layout: covidcast_app diff --git a/content/tools/_index.md b/content/tools/_index.md index a2e599ea1..934c1e5ed 100644 --- a/content/tools/_index.md +++ b/content/tools/_index.md @@ -1,5 +1,5 @@ --- -title: Tools +title: Tools Overview layout: single --- From f51743cb8d63030477ef95fe7e5b1bfb15e65248 Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Sun, 26 Sep 2021 20:52:00 -0400 Subject: [PATCH 13/19] feat: alias /about/blog to /blog --- content/blog/_index.md | 2 ++ 1 file changed, 2 insertions(+) diff --git a/content/blog/_index.md b/content/blog/_index.md index 90790406f..156d96b37 100644 --- a/content/blog/_index.md +++ b/content/blog/_index.md @@ -1,4 +1,6 @@ --- title: Blog description: News, findings, and musings from the team +aliases: + - /about/blog/ --- From b2ac4fbb68d4563bda610bfa84db6f39a9c9eab7 Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Tue, 28 Sep 2021 08:11:47 -0400 Subject: [PATCH 14/19] feat: blog breadcrumbs --- themes/delphi/layouts/blog/list.html | 3 +++ themes/delphi/layouts/blog/single.html | 3 +++ .../layouts/partials/blog/breadcrumb.html | 19 +++++++++++++++++++ 3 files changed, 25 insertions(+) create mode 100644 themes/delphi/layouts/partials/blog/breadcrumb.html diff --git a/themes/delphi/layouts/blog/list.html b/themes/delphi/layouts/blog/list.html index 94c1f9c2d..ceaa7f8d3 100644 --- a/themes/delphi/layouts/blog/list.html +++ b/themes/delphi/layouts/blog/list.html @@ -1,3 +1,6 @@ +{{ define "breadcrumb" }} + {{ partial "blog/breadcrumb.html" . }} +{{ end }} {{ define "main" }} {{ $images := ($.GetPage "/blog/images").Resources.ByType "image" }}
    diff --git a/themes/delphi/layouts/blog/single.html b/themes/delphi/layouts/blog/single.html index 9512219d8..a80f11f07 100644 --- a/themes/delphi/layouts/blog/single.html +++ b/themes/delphi/layouts/blog/single.html @@ -2,6 +2,9 @@ {{ $blog_style := resources.Get "css/blog_extra.scss" | toCSS | minify | fingerprint }} {{ end }} +{{ define "breadcrumb" }} + {{ partial "blog/breadcrumb.html" . }} +{{ end }} {{ define "scripts" }} {{ $script_blog := resources.Get "js/blog/index.js" | js.Build | minify | fingerprint -}} {{ end }} diff --git a/themes/delphi/layouts/partials/blog/breadcrumb.html b/themes/delphi/layouts/partials/blog/breadcrumb.html new file mode 100644 index 000000000..240292495 --- /dev/null +++ b/themes/delphi/layouts/partials/blog/breadcrumb.html @@ -0,0 +1,19 @@ +
    +
    + +
    +
    From d374d5d206b65ba6343a484a27b568b644a06f56 Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Tue, 28 Sep 2021 08:25:19 -0400 Subject: [PATCH 15/19] refactor: move pages (with aliases) and better link titles --- README.md | 2 +- config.toml | 4 ++-- content/about/_index.md | 3 ++- content/about/center-of-excellence/index.md | 1 + content/about/team/index.md | 1 + content/blog/2020-08-28-api.Rmd | 2 +- content/blog/2020-08-28-api.html | 2 +- content/blog/2020-10-06-survey-wave-4.Rmd | 4 ++-- content/blog/2020-10-06-survey-wave-4.html | 4 ++-- content/blog/2021-01-22-holiday-surveys.Rmd | 4 ++-- content/blog/2021-01-22-holiday-surveys.html | 4 ++-- content/covid19/_index.md | 1 + content/{covidcast/surveys.md => covid19/ctis.md} | 15 +++++++++------ content/{covidcast => covid19}/terms-of-use.md | 9 ++++++--- content/covidcast/_index.md | 2 +- content/tools/_index.md | 1 + themes/delphi/layouts/partials/footer.html | 4 ++-- 17 files changed, 37 insertions(+), 26 deletions(-) rename content/{covidcast/surveys.md => covid19/ctis.md} (98%) rename content/{covidcast => covid19}/terms-of-use.md (99%) diff --git a/README.md b/README.md index 1a5a42f21..31e364347 100644 --- a/README.md +++ b/README.md @@ -24,7 +24,7 @@ A relative reference to another page can be created using the `relref` shortcode **Examples** ``` -national daily survey]({{< relref "surveys">}}) +national daily survey]({{< relref "ctis">}}) [syndromic COVID-19 indicator based on doctor visits]({{< relref "2020-10-14-dv-signal" >}}) [self-reported symptoms]({{< relref "2020-08-26-fb-survey#whats-in-the-survey" >}}) ``` diff --git a/config.toml b/config.toml index c5c1ae89e..f04fbc2f2 100644 --- a/config.toml +++ b/config.toml @@ -68,7 +68,7 @@ relativeURLs = false [[menu.main]] parent = "covid19" name = "About CTIS" - url = "/covidcast/surveys" + url = "/covid19/ctis" weight = 10 [[menu.main]] identifier = "covid19-covidcast" @@ -89,7 +89,7 @@ relativeURLs = false [[menu.main]] parent = "covid19" name = "Terms Of Use" - url = "/covidcast/terms-of-use" + url = "/covid19/terms-of-use" weight = 50 # flu diff --git a/content/about/_index.md b/content/about/_index.md index 1feac84e5..e787a5064 100644 --- a/content/about/_index.md +++ b/content/about/_index.md @@ -1,5 +1,6 @@ --- title: Delphi Research Group +linkTitle: About Delphi layout: about collaborators: @@ -44,7 +45,7 @@ Public health authorities (federal, state, local), the healthcare industry, the - Several of the underlying data sources (on which these indicators are built) would not exist or be publicly available without our efforts. This includes: - - A massive [national daily survey]({{< relref "surveys">}}) we're running in [partnership with Facebook](https://covid-survey.dataforgood.fb.com/survey_and_map_data.html). Over 12 million Americans have answered the survey since April, providing real-time insights into, e.g., [self-reported symptoms]({{< relref "2020-08-26-fb-survey#whats-in-the-survey" >}}), [mask wearing]({{< relref "2020-10-06-survey-wave-4.html#mask-wearing" >}}), [testing]({{< relref "2020-10-06-survey-wave-4#testing" >}}), and contacts, all broken down by various demographics. + - A massive [national daily survey]({{< relref "ctis">}}) we're running in [partnership with Facebook](https://covid-survey.dataforgood.fb.com/survey_and_map_data.html). Over 12 million Americans have answered the survey since April, providing real-time insights into, e.g., [self-reported symptoms]({{< relref "2020-08-26-fb-survey#whats-in-the-survey" >}}), [mask wearing]({{< relref "2020-10-06-survey-wave-4.html#mask-wearing" >}}), [testing]({{< relref "2020-10-06-survey-wave-4#testing" >}}), and contacts, all broken down by various demographics. - An enormous database of medical insurance claims that have been de-identified in accordance with HIPAA privacy regulations, covering more than half the US population, made possible through health system partners including Change Healthcare. We use this to produce a new [syndromic COVID-19 indicator based on doctor visits]({{< relref "2020-10-14-dv-signal" >}}), and other indicators based on hospitalizations and ICU admissions. diff --git a/content/about/center-of-excellence/index.md b/content/about/center-of-excellence/index.md index ab067fbf0..8bf4c1108 100644 --- a/content/about/center-of-excellence/index.md +++ b/content/about/center-of-excellence/index.md @@ -1,5 +1,6 @@ --- title: Delphi National Center of Excellence for Epidemic Forecasting +linkTitle: Center of Excellence layout: coe members: - name: Carnegie Mellon University diff --git a/content/about/team/index.md b/content/about/team/index.md index ce16e9c29..21c2d2ca4 100644 --- a/content/about/team/index.md +++ b/content/about/team/index.md @@ -1,5 +1,6 @@ --- title: Delphi Team Members +linkTitle: Our Team layout: team --- diff --git a/content/blog/2020-08-28-api.Rmd b/content/blog/2020-08-28-api.Rmd index 17286e5d4..3828a5b36 100644 --- a/content/blog/2020-08-28-api.Rmd +++ b/content/blog/2020-08-28-api.Rmd @@ -173,7 +173,7 @@ cover most levels of the severity pyramid and include: Our `r blogdown::shortcode_html("reflink", "2020-08-26-fb-survey", "previous blog post")` showed how the survey can indicate COVID-19 activity, and preliminary analysis also suggests `r blogdown::shortcode_html("reflink", "2020-09-21-forecast-demo", "it can help forecast COVID-19 cases")`. - See our `r blogdown::shortcode_html("reflink", "surveys", "surveys site")` + See our `r blogdown::shortcode_html("reflink", "ctis", "surveys site")` for more on the survey, its questions, and getting access to data. - Massive surveys we run through Google: From April 11 to May 14, 2020, Delphi conducted a single-question symptoms survey diff --git a/content/blog/2020-08-28-api.html b/content/blog/2020-08-28-api.html index 148febc34..5a16146ff 100644 --- a/content/blog/2020-08-28-api.html +++ b/content/blog/2020-08-28-api.html @@ -173,7 +173,7 @@

    Unique Data Sources

    Our {{< reflink "2020-08-26-fb-survey" "previous blog post" >}} showed how the survey can indicate COVID-19 activity, and preliminary analysis also suggests {{< reflink "2020-09-21-forecast-demo" "it can help forecast COVID-19 cases" >}}. -See our {{< reflink "surveys" "surveys site" >}} +See our {{< reflink "ctis" "surveys site" >}} for more on the survey, its questions, and getting access to data.
  • Massive surveys we run through Google: From April 11 to May 14, 2020, Delphi conducted a single-question symptoms survey diff --git a/content/blog/2020-10-06-survey-wave-4.Rmd b/content/blog/2020-10-06-survey-wave-4.Rmd index 792ebe357..bc7c1c56d 100644 --- a/content/blog/2020-10-06-survey-wave-4.Rmd +++ b/content/blog/2020-10-06-survey-wave-4.Rmd @@ -363,7 +363,7 @@ available through our COVIDcast API, and the exact technical details are described in our `r blogdown::shortcode_html("apireflink", "api/covidcast-signals/fb-survey.html", "signal documentation")`. The symptom and mask data is already featured on our `r blogdown::shortcode_html("reflink", "covidcast?sensor=fb-survey-smoothed_wearing_mask&level=county&signalType=value&encoding=color&mode=overview®ion=42003", "COVIDcast interactive map")`, and other survey signals will soon be added as well. More information about the -surveys, including preliminary results, is given on our `r blogdown::shortcode_html("reflink", "surveys", "survey site")`. +surveys, including preliminary results, is given on our `r blogdown::shortcode_html("reflink", "ctis", "survey site")`. But we also know that many researchers will have questions that can't be answered from these simple county- and state-level averages. What occupations @@ -392,7 +392,7 @@ data, we can make decisions needed to protect public health and permit safe reopening. _For more information about Delphi's symptom surveys, and for media contact -details, see `r blogdown::shortcode_html("reflink", "surveys", "our surveys page")`. For +details, see `r blogdown::shortcode_html("reflink", "ctis", "our surveys page")`. For updates, you can follow [CmuDelphi on Twitter](https://twitter.com/cmudelphi)._ **Note.** _This post was updated on October 17, 2020 to correct an error in the diff --git a/content/blog/2020-10-06-survey-wave-4.html b/content/blog/2020-10-06-survey-wave-4.html index 6f8623384..96ec4092e 100644 --- a/content/blog/2020-10-06-survey-wave-4.html +++ b/content/blog/2020-10-06-survey-wave-4.html @@ -342,7 +342,7 @@

    You Can Help Analyze This Data

    described in our {{< apireflink "api/covidcast-signals/fb-survey.html" "signal documentation" >}}. The symptom and mask data is already featured on our {{< reflink "covidcast?sensor=fb-survey-smoothed_wearing_mask&level=county&signalType=value&encoding=color&mode=overview®ion=42003" "COVIDcast interactive map" >}}, and other survey signals will soon be added as well. More information about the -surveys, including preliminary results, is given on our {{< reflink "surveys" "survey site" >}}.

    +surveys, including preliminary results, is given on our {{< reflink "ctis" "survey site" >}}.

    But we also know that many researchers will have questions that can’t be answered from these simple county- and state-level averages. What occupations have the highest rate of COVID-19? What age groups engage in the most behavior @@ -367,7 +367,7 @@

    You Can Help Analyze This Data

    data, we can make decisions needed to protect public health and permit safe reopening.

    For more information about Delphi’s symptom surveys, and for media contact -details, see {{< reflink "surveys" "our surveys page" >}}. For +details, see {{< reflink "ctis" "our surveys page" >}}. For updates, you can follow CmuDelphi on Twitter.

    Note. This post was updated on October 17, 2020 to correct an error in the scatterplot of mask usage and reported case rates. An error in our data diff --git a/content/blog/2021-01-22-holiday-surveys.Rmd b/content/blog/2021-01-22-holiday-surveys.Rmd index 1656c3025..23ed46348 100644 --- a/content/blog/2021-01-22-holiday-surveys.Rmd +++ b/content/blog/2021-01-22-holiday-surveys.Rmd @@ -39,7 +39,7 @@ gatherings during the holidays and a number of states expanded COVID-19 restrictions to prevent further escalation in cases. [Reports](https://www.washingtonpost.com/travel/2020/12/21/christmas-flights-cdc-restrictions-covid/) from airlines suggest air travel was up significantly during the holiday season, -but `r blogdown::shortcode_html("reflink", "surveys", "Delphi’s COVID-19 Surveys")` can +but `r blogdown::shortcode_html("reflink", "ctis", "Delphi’s COVID-19 Surveys")` can provide a broader picture of the travel Americans took during the holiday season. In taking greater risks with travel, did Americans change their behaviors in other preventative measures like mask wearing during this time? @@ -410,7 +410,7 @@ Since April 2020, Carnegie Mellon University’s Delphi Group and Facebook’s D for Good have partnered to conduct large-scale daily surveys to monitor the spread and impact of the COVID-19 pandemic in the United States. To date, the survey has collected more than 50 million responses. In this post, we show how -the data from the `r blogdown::shortcode_html("reflink", "surveys", "COVID-19 survey")` +the data from the `r blogdown::shortcode_html("reflink", "ctis", "COVID-19 survey")` can be used to provide a broader picture of how American’s risk behaviors and sentiments amidst a global pandemic. diff --git a/content/blog/2021-01-22-holiday-surveys.html b/content/blog/2021-01-22-holiday-surveys.html index 324c99e89..1e36afc43 100644 --- a/content/blog/2021-01-22-holiday-surveys.html +++ b/content/blog/2021-01-22-holiday-surveys.html @@ -49,7 +49,7 @@ restrictions to prevent further escalation in cases. Reports from airlines suggest air travel was up significantly during the holiday season, -but {{< reflink "surveys" "Delphi’s COVID-19 Surveys" >}} can +but {{< reflink "ctis" "Delphi’s COVID-19 Surveys" >}} can provide a broader picture of the travel Americans took during the holiday season. In taking greater risks with travel, did Americans change their behaviors in other preventative measures like mask wearing during this time?

    @@ -396,7 +396,7 @@

    See the Data Yourself!

    for Good have partnered to conduct large-scale daily surveys to monitor the spread and impact of the COVID-19 pandemic in the United States. To date, the survey has collected more than 50 million responses. In this post, we show how -the data from the {{< reflink "surveys" "COVID-19 survey" >}} +the data from the {{< reflink "ctis" "COVID-19 survey" >}} can be used to provide a broader picture of how American’s risk behaviors and sentiments amidst a global pandemic.

    All of the above plots were built using aggregate data for the United States diff --git a/content/covid19/_index.md b/content/covid19/_index.md index 2740b4bb9..ef2e8cb0a 100644 --- a/content/covid19/_index.md +++ b/content/covid19/_index.md @@ -1,5 +1,6 @@ --- title: About COVIDcast +linkTitle: COVID-19 layout: single --- diff --git a/content/covidcast/surveys.md b/content/covid19/ctis.md similarity index 98% rename from content/covidcast/surveys.md rename to content/covid19/ctis.md index e369d8443..c28da80ce 100644 --- a/content/covidcast/surveys.md +++ b/content/covid19/ctis.md @@ -1,5 +1,8 @@ --- title: Delphi's COVID-19 Trends and Impact Surveys (CTIS) +linkTitle: About CTIS +aliases: + - /covidcast/surveys --- {{< alert category="primary">}} @@ -83,14 +86,14 @@ Getting access to survey data for research: [complete this form](https://datafor ### Media inquiries: -[Stacy Kish](mailto:skish@andrew.cmu.edu) -Associate Director, Research Communications -Dietrich College +[Stacy Kish](mailto:skish@andrew.cmu.edu) +Associate Director, Research Communications +Dietrich College Carnegie Mellon University ### All other questions: -[Alex Reinhart](mailto:areinhar@stat.cmu.edu) -Assistant Teaching Professor -Department of Statistics & Data Science +[Alex Reinhart](mailto:areinhar@stat.cmu.edu) +Assistant Teaching Professor +Department of Statistics & Data Science Carnegie Mellon University diff --git a/content/covidcast/terms-of-use.md b/content/covid19/terms-of-use.md similarity index 99% rename from content/covidcast/terms-of-use.md rename to content/covid19/terms-of-use.md index 1876f4ffd..aed8f8364 100644 --- a/content/covidcast/terms-of-use.md +++ b/content/covid19/terms-of-use.md @@ -1,5 +1,8 @@ --- title: Carnegie Mellon University COVIDcast Website Terms of Use +linkTitle: Terms of Use +aliases: + - /covidcast/terms-of-use --- Version Date: November 25, 2020 @@ -42,9 +45,9 @@ If the Site is at any time deemed an electronic commercial service (as defined u The provider of the Site is: -Carnegie Mellon University -5000 Forbes Avenue -Pittsburgh, PA 15213 +Carnegie Mellon University +5000 Forbes Avenue +Pittsburgh, PA 15213 412-268-2000 If the Site is deemed as electronic commercial service, you may file a complaint regarding the Site or to receive further information regarding use of the Site by sending a letter to the attention of “Legal Department” at the above address. diff --git a/content/covidcast/_index.md b/content/covidcast/_index.md index b0f95dc14..a6a68e8d4 100644 --- a/content/covidcast/_index.md +++ b/content/covidcast/_index.md @@ -1,5 +1,5 @@ --- -title: CTIS Dashboard +title: COVIDcast Dashboard description: COVIDcast tracks and forecasts the spread of COVID-19. By Carnegie Mellon's Delphi Research Group. layout: covidcast_app app_mode: landing diff --git a/content/tools/_index.md b/content/tools/_index.md index 934c1e5ed..ed1ee74b7 100644 --- a/content/tools/_index.md +++ b/content/tools/_index.md @@ -1,5 +1,6 @@ --- title: Tools Overview +linkTitle: Tools layout: single --- diff --git a/themes/delphi/layouts/partials/footer.html b/themes/delphi/layouts/partials/footer.html index 5d72562cf..f4291b8f8 100644 --- a/themes/delphi/layouts/partials/footer.html +++ b/themes/delphi/layouts/partials/footer.html @@ -9,7 +9,7 @@

    COVIDcast
    • From c6fa9c0552ea293df796460120ff26d3c394f891 Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Wed, 29 Sep 2021 21:56:29 -0400 Subject: [PATCH 16/19] style: fix menu layout --- themes/delphi/assets/css/layout/_header_footer.scss | 2 +- themes/delphi/layouts/partials/nav.html | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/themes/delphi/assets/css/layout/_header_footer.scss b/themes/delphi/assets/css/layout/_header_footer.scss index 8ff4fd490..b1fb152bb 100644 --- a/themes/delphi/assets/css/layout/_header_footer.scss +++ b/themes/delphi/assets/css/layout/_header_footer.scss @@ -38,7 +38,7 @@ $mobile-margin: 15px; } .uk-navbar-dropdown { - width: 300px; + width: 13em; } } diff --git a/themes/delphi/layouts/partials/nav.html b/themes/delphi/layouts/partials/nav.html index 8ae73c994..19895e556 100644 --- a/themes/delphi/layouts/partials/nav.html +++ b/themes/delphi/layouts/partials/nav.html @@ -11,7 +11,7 @@
      {{ range .Site.Menus.main.ByWeight }}
    • From 53298c4743c153a6153c2660f441deee7e68e1b9 Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Tue, 12 Oct 2021 19:56:29 -0400 Subject: [PATCH 17/19] fix: new lines in terms-of-use --- content/covid19/ctis.md | 12 ++++++------ content/covid19/terms-of-use.md | 6 +++--- 2 files changed, 9 insertions(+), 9 deletions(-) diff --git a/content/covid19/ctis.md b/content/covid19/ctis.md index 58138873c..10dedc011 100644 --- a/content/covid19/ctis.md +++ b/content/covid19/ctis.md @@ -88,14 +88,14 @@ Getting access to survey data for research: [complete this form](https://datafor ### Media inquiries: -[Stacy Kish](mailto:skish@andrew.cmu.edu) -Associate Director, Research Communications -Dietrich College +[Stacy Kish](mailto:skish@andrew.cmu.edu) +Associate Director, Research Communications +Dietrich College Carnegie Mellon University ### All other questions: -[Alex Reinhart](mailto:areinhar@stat.cmu.edu) -Assistant Teaching Professor -Department of Statistics & Data Science +[Alex Reinhart](mailto:areinhar@stat.cmu.edu) +Assistant Teaching Professor +Department of Statistics & Data Science Carnegie Mellon University diff --git a/content/covid19/terms-of-use.md b/content/covid19/terms-of-use.md index aed8f8364..bdffe8ec3 100644 --- a/content/covid19/terms-of-use.md +++ b/content/covid19/terms-of-use.md @@ -45,9 +45,9 @@ If the Site is at any time deemed an electronic commercial service (as defined u The provider of the Site is: -Carnegie Mellon University -5000 Forbes Avenue -Pittsburgh, PA 15213 +Carnegie Mellon University +5000 Forbes Avenue +Pittsburgh, PA 15213 412-268-2000 If the Site is deemed as electronic commercial service, you may file a complaint regarding the Site or to receive further information regarding use of the Site by sending a letter to the attention of “Legal Department” at the above address. From 99c553163f7597ab9a49d78455ec85d0ce5dd6b3 Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Tue, 12 Oct 2021 20:00:06 -0400 Subject: [PATCH 18/19] fix: restore old text --- content/about/_index.md | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/content/about/_index.md b/content/about/_index.md index e8152ffe1..147b05692 100644 --- a/content/about/_index.md +++ b/content/about/_index.md @@ -61,6 +61,4 @@ In reverse chronological order. - **2016.** We developed and deployed the [Epidata API]({{< apiref "/" >}}), which provides real-time access to epidemiological surveillance data. -- Since April 2020, we've been supporting and advising U.S. CDC in their community-driven COVID-19 forecasting effort, which includes [creating and evaluating an ensemble forecast]({{< relref "2020-09-21-forecast-demo" >}}) from the 70+ forecasts under submission that serves as the basis for the [CDC's official COVID-19 forecast communications](https://www.cdc.gov/coronavirus/2019-ncov/covid-data/forecasting-us.html). We also contribute our own short-term forecasts of COVID-19 cases and deaths, which can be found in the [COVID-19 Forecast Hub](https://covid19forecasthub.org). - - +- **2013.** We began supporting the U.S. CDC's Influenza Division in advancing and growing a [scientific community around influenza forecasting](https://www.cdc.gov/flu/weekly/flusight/index.html). We've been [perennial leaders in forecasting accuracy](https://www.cs.cmu.edu/~roni/CDC%20Flu%20Challenge%202014-2018%20Results.pdf) ever since. From 8e93505817d22ebb3ece10cc909fc8cfe3d34cea Mon Sep 17 00:00:00 2001 From: Samuel Gratzl Date: Tue, 12 Oct 2021 20:02:48 -0400 Subject: [PATCH 19/19] fix: ref link --- content/about/_index.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/content/about/_index.md b/content/about/_index.md index 147b05692..2490e65f6 100644 --- a/content/about/_index.md +++ b/content/about/_index.md @@ -50,7 +50,7 @@ In reverse chronological order. * Several of the underlying data sources (on which these indicators are built) would not exist or be publicly available without our efforts. This includes: - * A massive [national daily survey]({{< relref "surveys">}}) we're running in [partnership with Facebook](https://covid-survey.dataforgood.fb.com/survey_and_map_data.html). Over 20 million Americans have answered the survey since April 2020, providing real-time insights into, e.g., self-reported symptoms, mask wearing, testing, contacts, and vaccination. + * A massive [national daily survey]({{< relref "ctis">}}) we're running in [partnership with Facebook](https://covid-survey.dataforgood.fb.com/survey_and_map_data.html). Over 20 million Americans have answered the survey since April 2020, providing real-time insights into, e.g., self-reported symptoms, mask wearing, testing, contacts, and vaccination. * An enormous database of medical insurance claims that have been de-identified in accordance with HIPAA privacy regulations, covering more than half the U.S. population. This data is made available by health system partners including Change Healthcare, and provides insights into disease activity through outpatient visits and hospitalizations.