From 075cc6b288511ec9c599e70cd000c359e8b0dcf5 Mon Sep 17 00:00:00 2001 From: Katie Mazaitis Date: Wed, 27 Oct 2021 13:11:22 -0400 Subject: [PATCH 1/2] Docs update for covidcast:hhs+flu --- docs/api/covidcast-signals/hhs.md | 28 ++++++++++++++++++++++------ 1 file changed, 22 insertions(+), 6 deletions(-) diff --git a/docs/api/covidcast-signals/hhs.md b/docs/api/covidcast-signals/hhs.md index cee707aee..82baaa5e6 100644 --- a/docs/api/covidcast-signals/hhs.md +++ b/docs/api/covidcast-signals/hhs.md @@ -24,10 +24,12 @@ datasets is mirrored in Epidata at the following endpoint: That dataset contains dozens of columns that break down hospital resource usage in different ways. -This indicator makes available several commonly-used combinations of -those columns, aggregated geographically. In particular, we include -the sum of all adult and pediatric COVID-19 hospital admissions. This -sum is used as the "ground truth" for hospitalizations by the [COVID-19 Forecast Hub](https://github.com/reichlab/covid19-forecast-hub/blob/master/data-processed/README.md#hospitalizations). +This indicator makes available several commonly-used columns and combinations of +columns, aggregated geographically. In particular, we include the sum of all +adult and pediatric COVID-19 hospital admissions. This sum is used as the +"ground truth" for hospitalizations by the +[COVID-19 Forecast Hub](https://github.com/reichlab/covid19-forecast-hub/blob/master/data-processed/README.md#hospitalizations). +We also include influenza hospital admissions. | Signal | 7-day average signal | Geography | Resolution | Description | @@ -36,6 +38,9 @@ sum is used as the "ground truth" for hospitalizations by the [COVID-19 Forecast | `confirmed_admissions_covid_1d_prop` | `confirmed_admissions_covid_1d_prop_7dav`| state | 1 day | Sum of adult and pediatric confirmed COVID-19 hospital admissions occurring each day, per 100,000 population.
**Earliest date available:** 2019-12-31 | | `sum_confirmed_suspected_admissions_covid_1d` | `sum_confirmed_suspected_admissions_covid_1d_7dav` | state | 1 day | Sum of adult and pediatric confirmed and suspected COVID-19 hospital admissions occurring each day.
**Earliest date available:** 2019-12-31 | | `sum_confirmed_suspected_admissions_covid_1d_prop` | `sum_confirmed_suspected_admissions_covid_1d_prop_7dav` | state | 1 day | Sum of adult and pediatric confirmed and suspected COVID-19 hospital admissions occurring each day, per 100,000 population.
**Earliest date available:** 2019-12-31 | +| `confirmed_admissions_influenza_1d` | `confirmed_admissions_influenza_1d_7dav` | state | 1 day | All confirmed influenza hospital admissions occuring each day. We made this signal available November 1, 2021.
**Earliest issue available:** 2021-09-20
**Earliest date available:** 2020-01-02 | +| `confirmed_admissions_influenza_1d_prop` | `confirmed_admissions_influenza_1d_prop_7dav` | state | 1 day | All confirmed influenza hospital admissions occuring each day, per 100,000 population. We made this signal available November 1, 2021.
**Earliest issue available:** 2021-09-20
**Earliest date available:** 2020-01-02 | + The 7-day average signals are computed by Delphi by calculating moving averages of the preceding 7 days, so e.g. the signal for June 7 is the @@ -49,9 +54,9 @@ average of the underlying data for June 1 through 7, inclusive. ## Estimation -### Statewise, daily resolution +### Statewise, daily resolution, COVID-19 -Statewise daily resolution signals use the following four columns from +Statewise daily resolution signals for COVID-19 use the following four columns from the HHS state timeseries dataset: * `previous_day_admission_[adult|pediatric]_covid_[confirmed|suspected]` @@ -72,6 +77,17 @@ The source data specifies that admissions occurred on the previous day. We automatically adjust the date of each result so that admissions are incident on that date. +### Statewise, daily resolution, influenza + +Statewise daily resolution signals for influenza use the following column from +the HHS state timeseries dataset: + +* `previous_day_admission_influenza_confirmed` + +The source data specifies that admissions occurred on the previous day. We +automatically adjust the date of each result so that admissions are incident on +that date. + ## Limitations HHS collects data from state and territorial health departments about many, but From ebe2ca5419d964e2ca56cf6613d237abc05fd762 Mon Sep 17 00:00:00 2001 From: Katie Mazaitis Date: Wed, 27 Oct 2021 13:15:34 -0400 Subject: [PATCH 2/2] Spelling --- docs/api/covidcast-signals/hhs.md | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/docs/api/covidcast-signals/hhs.md b/docs/api/covidcast-signals/hhs.md index 82baaa5e6..c70b85242 100644 --- a/docs/api/covidcast-signals/hhs.md +++ b/docs/api/covidcast-signals/hhs.md @@ -38,8 +38,8 @@ We also include influenza hospital admissions. | `confirmed_admissions_covid_1d_prop` | `confirmed_admissions_covid_1d_prop_7dav`| state | 1 day | Sum of adult and pediatric confirmed COVID-19 hospital admissions occurring each day, per 100,000 population.
**Earliest date available:** 2019-12-31 | | `sum_confirmed_suspected_admissions_covid_1d` | `sum_confirmed_suspected_admissions_covid_1d_7dav` | state | 1 day | Sum of adult and pediatric confirmed and suspected COVID-19 hospital admissions occurring each day.
**Earliest date available:** 2019-12-31 | | `sum_confirmed_suspected_admissions_covid_1d_prop` | `sum_confirmed_suspected_admissions_covid_1d_prop_7dav` | state | 1 day | Sum of adult and pediatric confirmed and suspected COVID-19 hospital admissions occurring each day, per 100,000 population.
**Earliest date available:** 2019-12-31 | -| `confirmed_admissions_influenza_1d` | `confirmed_admissions_influenza_1d_7dav` | state | 1 day | All confirmed influenza hospital admissions occuring each day. We made this signal available November 1, 2021.
**Earliest issue available:** 2021-09-20
**Earliest date available:** 2020-01-02 | -| `confirmed_admissions_influenza_1d_prop` | `confirmed_admissions_influenza_1d_prop_7dav` | state | 1 day | All confirmed influenza hospital admissions occuring each day, per 100,000 population. We made this signal available November 1, 2021.
**Earliest issue available:** 2021-09-20
**Earliest date available:** 2020-01-02 | +| `confirmed_admissions_influenza_1d` | `confirmed_admissions_influenza_1d_7dav` | state | 1 day | All confirmed influenza hospital admissions occurring each day. We made this signal available November 1, 2021.
**Earliest issue available:** 2021-09-20
**Earliest date available:** 2020-01-02 | +| `confirmed_admissions_influenza_1d_prop` | `confirmed_admissions_influenza_1d_prop_7dav` | state | 1 day | All confirmed influenza hospital admissions occurring each day, per 100,000 population. We made this signal available November 1, 2021.
**Earliest issue available:** 2021-09-20
**Earliest date available:** 2020-01-02 | The 7-day average signals are computed by Delphi by calculating