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Merge pull request #115 from cmu-delphi/develop/nowcast-docs
Update to 1.2.1 combination signal, and fix map table
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docs/api/covidcast_signals.md

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@@ -158,14 +158,22 @@ filtering, smoothing, or changes.
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This source provides signals which are statistical combinations of the other
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sources above. It is not a primary data source.
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* `nmf_day_doc_fbs_ght`: This signal uses a rank-1 approximation, from a
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* `nmf_day_doc_fbc_fbs_ght`: This signal uses a rank-1 approximation, from a
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nonnegative matrix factorization approach, to identify an underlying signal
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that best reconstructs the Doctor Visits (`smoothed_cli`), Facebook Symptoms surveys (`smoothed_cli`), and Search Trends (`smoothed_search`)
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indicators. It does not include official reports (cases and deaths from the
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`jhu-csse` source). Higher values of the combined signal correspond to higher
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values of the other indicators, but the scale (units) of the combination is
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arbitrary. Note that the Search Trends source is not available at the county
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level, so county values of this signal do not use it.
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that best reconstructs the Doctor Visits (`smoothed_adj_cli`), Facebook
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Symptoms surveys (`smoothed_cli`), Facebook Symptoms in Community surveys
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(`smoothed_hh_cmnty_cli`), and Search Trends (`smoothed_search`) indicators.
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It does not include official reports (cases and deaths from the `jhu-csse`
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source). Higher values of the combined signal correspond to higher values of
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the other indicators, but the scale (units) of the combination is arbitrary.
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Note that the Search Trends source is not available at the county level, so
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county values of this signal do not use it.
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* `nmf_day_doc_fbs_ght`: This signal is calculated in the same way as
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`nmf_day_doc_fbc_fbs_ght`, but does *not* include the Symptoms in Community
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survey signal, which was not available at the time this signal was introduced.
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It also uses `smoothed_cli` from the `doctor-visits` source instead of
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`smoothed_adj_cli`. This signal is deprecated and is no longer updated as of
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May 28, 2020.
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## COVIDcast Map Signals
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@@ -175,8 +183,9 @@ map](https://covidcast.cmu.edu/):
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| Name | Source | Signal |
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| --- | --- | --- |
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| Doctor's Visits | `doctor-visits` | `smoothed_adj_cli` |
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| Surveys (Facebook) | `fb-survey` | `smoothed_cli` |
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| Surveys (Google) | `google-survey` | `smoothed_cli` |
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| Symptoms (Facebook) | `fb-survey` | `smoothed_cli` |
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| Symptoms in Community (Facebook) | `fb-survey` | `smoothed_hh_cmnty_cli` |
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| Search Trends (Google) | `ght` | `smoothed_search` |
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| Combined | `indicator-combination` | `nmf_day_doc_fbc_fbs_ght` |
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| Cases (JHU) | `jhu-csse` | `confirmed_incidence_prop` |
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| Deaths (JHU) | `jhu-csse` | `deaths_incidence_prop` |

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