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bjlittlebjlittle
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refresh ncta
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‎.cirrus.yml‎

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# Reference:
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# - https://cirrus-ci.org/guide/writing-tasks/
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# - https://cirrus-ci.org/guide/linux/
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# - https://hub.docker.com/_/gcc/
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# - https://hub.docker.com/_/python/
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#
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# Global defaults.
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#
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container:
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image: python:latest
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cpu: 2
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memory: 4G
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env:
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# Maximum cache period (in weeks) before forcing a new cache upload.
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CACHE_PERIOD: "2"
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# Increment the build number to force new mambaforge cache upload.
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MAMBA_CACHE_BUILD: "0"
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# Increment the build number to force new mint cache upload.
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NCTA_CACHE_BUILD: "0"
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# Base environment conda packages to be installed
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MAMBA_CACHE_PACKAGES: "pip conda-lock"
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# Increment the build number to forve new pip cache upload.
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PIP_CACHE_BUILD: "0"
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# Linting packages to be installed.
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PIP_CACHE_PACKAGES: "black flake8 isort"
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#
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# Linting
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#
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lint_task:
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auto_cancellation: true
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name: "${CIRRUS_OS}: linting"
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pip_cache:
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folder: ~/.cache/pip
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fingerprint_script:
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- echo "${CIRRUS_TASK_NAME} py${PYTHON_VERSION}"
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- echo "$(date +%Y).$(expr $(date +%U) / ${CACHE_PERIOD}):${PIP_CACHE_BUILD} ${PIP_CACHE_PACKAGES}"
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lint_script:
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- pip list
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- python -m pip install --retries 3 --upgrade ${PIP_CACHE_PACKAGES}
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- pip list
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- black --check ${CIRRUS_WORKING_DIR}
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- flake8 ${CIRRUS_WORKING_DIR}
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- isort --check ${CIRRUS_WORKING_DIR}
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#
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# Testing (Linux)
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#
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linux_task:
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auto_cancellation: true
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matrix:
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env:
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PY_VER: "3.7"
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env:
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PY_VER: "3.8"
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env:
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PY_VER: "3.9"
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COVERAGE: "codecov"
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name: "${CIRRUS_OS}: py${PY_VER}"
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container:
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image: gcc:latest
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env:
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PATH: ${HOME}/mambaforge/bin:${PATH}
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mamba_cache:
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folder: ${HOME}/mambaforge
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fingerprint_script:
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- wget --quiet https://github.com/conda-forge/miniforge/releases/latest/download/Mambaforge-Linux-x86_64.sh -O mambaforge.sh
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- echo "${CIRRUS_OS} $(sha256sum mambaforge.sh)"
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- echo "${MAMBA_CACHE_PACKAGES}"
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- echo "$(date +%Y).$(expr $(date +%U) / ${CACHE_PERIOD}):${MAMBA_CACHE_BUILD}"
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populate_script:
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- bash mambaforge.sh -b -p ${HOME}/mambaforge
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- conda config --set always_yes yes --set changeps1 no
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- conda config --set show_channel_urls True
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- conda config --add channels conda-forge
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- conda install --quiet --name base ${MAMBA_CACHE_PACKAGES}
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check_script:
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- conda info --all
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- conda list --name base
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ncta_cache:
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folder: ${HOME}/mambaforge/envs/py${PY_VER}
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fingerprint_script:
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- echo "${CIRRUS_OS} py${PY_VER} tests"
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- echo "$(date +%Y).$(expr $(date +%U) / ${CACHE_PERIOD}):${MINT_CACHE_BUILD}"
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- cat ${CIRRUS_WORKING_DIR}/requirements/py$(echo ${PY_VER} | tr -d ".").yml
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populate_script:
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- conda-lock --mamba --platform linux-64 --file ${CIRRUS_WORKING_DIR}/requirements/py$(echo ${PY_VER} | tr -d ".").yml
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- mamba create --name py${PY_VER} --quiet --file conda-linux-64.lock
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- cp conda-linux-64.lock ${HOME}/mambaforge/envs/py${PY_VER}
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test_script:
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- cat ${HOME}/mambaforge/envs/py${PY_VER}/conda-linux-64.lock >&2
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- source ${HOME}/mambaforge/etc/profile.d/conda.sh >/dev/null 2>&1
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- conda activate py${PY_VER} >/dev/null 2>&1
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- pip install --no-deps --editable .
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- pytest --cov-report=xml --cov
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- ${COVERAGE}

‎.coveragerc‎

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#
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[run]
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source = nc_time_axis
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branch = True
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source = nc_time_axis
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omit =
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nc_time_axis/_version.py
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nc_time_axis/tests/*
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setup.py
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[report]
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exclude_lines =

‎.flake8‎

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[flake8]
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# References:
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# https://flake8.readthedocs.io/en/latest/user/configuration.html
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# https://flake8.readthedocs.io/en/latest/user/error-codes.html
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# https://pycodestyle.readthedocs.io/en/latest/intro.html#error-codes
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select = C,D,E,F,W,B,B950
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ignore =
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# E203: whitespace before ':'
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E203,
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# E226: missing whitespace around arithmetic operator
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E226,
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# E231: missing whitespace after ',', ';', or ':'
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E231,
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# E402: module level imports on one line
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E402,
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# E501: line too long
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E501,
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# E731: do not assign a lambda expression, use a def
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E731,
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# W503: line break before binary operator
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W503,
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# W504: line break after binary operator
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W504
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exclude =
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.eggs
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build

‎.gitignore‎

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# Directory-based project format:
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.idea/
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# Created by editors
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*~
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\#*
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\.\#*
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*.swp
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# setuptools-scm
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_version.py
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# Byte-compiled / optimized / DLL files
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__pycache__/
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*.py[cod]
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*$py.class
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# C extensions
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*.so
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# Distribution / packaging
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.Python
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env/
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build/
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develop-eggs/
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dist/
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downloads/
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eggs/
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.eggs/
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lib/
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lib64/
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parts/
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sdist/
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var/
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wheels/
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pip-wheel-metadata/
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share/python-wheels/
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*.egg-info/
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.installed.cfg
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*.egg
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MANIFEST
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# PyInstaller
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# Usually these files are written by a python script from a template
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# Unit test / coverage reports
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htmlcov/
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.tox/
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.nox/
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.coverage
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.coverage.*
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.cache
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nosetests.xml
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coverage.xml
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*,cover
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*.cover
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*.py,cover
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.hypothesis/
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.pytest_cache/
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# Translations
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*.mo
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*.pot
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# Django stuff:
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*.log
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local_settings.py
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db.sqlite3
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db.sqlite3-journal
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# Flask stuff:
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instance/
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.webassets-cache
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# Scrapy stuff:
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.scrapy
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# Sphinx documentation
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docs/_build/
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# PyBuilder
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target/
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# Created by editiors
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*~
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\#*
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\.\#*
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*.swp
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# Jupyter Notebook
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.ipynb_checkpoints
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# IPython
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profile_default/
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ipython_config.py
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# pyenv
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.python-version
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# pipenv
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# According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
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# However, in case of collaboration, if having platform-specific dependencies or dependencies
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# having no cross-platform support, pipenv may install dependencies that don't work, or not
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# install all needed dependencies.
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#Pipfile.lock
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# PEP 582; used by e.g. github.com/David-OConnor/pyflow
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__pypackages__/
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# Celery stuff
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celerybeat-schedule
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celerybeat.pid
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# SageMath parsed files
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*.sage.py
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# Environments
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.env
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.venv
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env/
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venv/
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ENV/
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env.bak/
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venv.bak/
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# Spyder project settings
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.spyderproject
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.spyproject
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# Rope project settings
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.ropeproject
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# mkdocs documentation
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/site
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# mypy
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.mypy_cache/
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.dmypy.json
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dmypy.json
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# Pyre type checker
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.pyre/

‎.pre-commit-config.yaml‎

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# See https://pre-commit.com for more information
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# See https://pre-commit.com/hooks.html for more hooks
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repos:
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- repo: https://github.com/pre-commit/pre-commit-hooks
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rev: 'v4.0.1'
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hooks:
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# Prevent giant files from being committed.
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- id: check-added-large-files
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# Check whether files parse as valid Python.
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- id: check-ast
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# Check for file name conflicts on case-insensitive filesytems.
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- id: check-case-conflict
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# Check for files that contain merge conflict strings.
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- id: check-merge-conflict
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# Check for debugger imports and py37+ `breakpoint()` calls in Python source.
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- id: debug-statements
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# Don't commit to master branch.
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- id: no-commit-to-branch
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- repo: https://github.com/psf/black
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rev: '21.5b2'
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hooks:
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- id: black
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# Force black to run on whole repo, using settings from pyproject.toml
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pass_filenames: false
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args: [--config=./pyproject.toml, .]
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- repo: https://github.com/PyCQA/flake8
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rev: '3.9.2'
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hooks:
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# Run flake8.
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- id: flake8
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args: [--config=./.flake8]
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- repo: https://github.com/pycqa/isort
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rev: '5.8.0'
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hooks:
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- id: isort
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name: isort
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args: ["--profile", "black", "--filter-files"]

‎.travis.yml‎

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This file was deleted.

‎MANIFEST.in‎

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include LICENSE
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include versioneer.py
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include nc_time_axis/_version.py
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recursive-include nc_time_axis/tests *.py
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graft requirements

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