Automated scripts reference document generation (CI)

Author: JohT

scripts/SCRIPTS.md

@@ -6,6 +6,7 @@ This file was generated with the script [generateScriptReference.sh](./generateS
 
 Script | Directory | Description
 -------|-----------|------------
+| [activateCondaEnvironment.sh](./activateCondaEnvironment.sh) |  | Activates the Conda (Python package manager) environment "codegraph" with all packages needed to execute the Jupyter Notebooks. |
 | [analyze.sh](./analysis/analyze.sh) | analysis | Coordinates the end-to-end analysis process, encompassing tool installation, graph generation, and report generation. |
 | [copyReportsIntoResults.sh](./copyReportsIntoResults.sh) |  | Copies the results from the temp directory to the results directory grouped by the analysis name. |
 | [detectChangedArtifacts.sh](./detectChangedArtifacts.sh) |  | Detect changed files in the artifacts directory with a text file containing the last hash code of the contents. |
@@ -23,6 +24,7 @@ Script | Directory | Description
 | [executeJupyterNotebook.sh](./executeJupyterNotebook.sh) |  | Executes all steps in the given Jupyter Notebook (ipynb), stores it and converts it to Markdown (md) and PDF. |
 | [executeQuery.sh](./executeQuery.sh) |  | Utilizes Neo4j's HTTP API to execute a Cypher query from an input file and provides the results in CSV format. |
 | [executeQueryFunctions.sh](./executeQueryFunctions.sh) |  | Provides functions to execute Cypher queries using either "executeQuery.sh" or Neo4j's "cypher-shell".  |
+| [operatingSystemFunctions.sh](./operatingSystemFunctions.sh) |  | Provides operating system dependent functions e.g. to detect Windows. |
 | [prepareAnalysis.sh](./prepareAnalysis.sh) |  | Prepares and validates the graph database before analysis  |
 | [Default.sh](./profiles/Default.sh) | profiles | Sets (if any) settings variables for a default analysis. |
 | [Neo4jv4.sh](./profiles/Neo4jv4.sh) | profiles | Sets all settings variables for an analysis with Neo4j v4.4.x (long term support (LTS) version as of may 2023). |
@@ -60,4 +62,4 @@ Script | Directory | Description
 | [setupNeo4jInitialPassword.sh](./setupNeo4jInitialPassword.sh) |  | Sets the initial password for the local Neo4j Graph Database (https://neo4j.com/download-center/#community). |
 | [startNeo4j.sh](./startNeo4j.sh) |  | Starts the local Neo4j Graph Database.  |
 | [stopNeo4j.sh](./stopNeo4j.sh) |  | Stops the local Neo4j Graph Database.  |
-| [waitForNeo4jHttp.sh](./waitForNeo4jHttp.sh) |  | Waits until the HTTP Transactions API of Neo4j Graph Database is available. |
+| [waitForNeo4jHttpFunctions.sh](./waitForNeo4jHttpFunctions.sh) |  | Waits until the HTTP Transactions API of Neo4j Graph Database is available. |