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{2023.06}[gompi/2023b] netCDF v4.9.2 #453

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Merged
merged 6 commits into from
Jan 19, 2024
Merged

{2023.06}[gompi/2023b] netCDF v4.9.2 #453

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b16dc0a
{2023.06}[gompi/2023b] netCDF v4.9.2
Jan 15, 2024
ea53cb7
Merge branch '2023.06-software.eessi.io' of gh-nessi:EESSI/software-l…
Jan 16, 2024
15c228b
added a hook for neoverse_v1 failing tests
Jan 16, 2024
90e2545
added eessi-2023.06-known-issues.yml
Jan 16, 2024
9944ab6
Update eb_hooks.py
TopRichard Jan 16, 2024
34f4c45
fix known issues YAML file for netCDF
boegel Jan 18, 2024
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3 changes: 3 additions & 0 deletions easystacks/software.eessi.io/2023.06/eessi-2023.06-eb-4.9.0-2023b.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -2,3 +2,6 @@ easyconfigs:
- GCC-13.2.0.eb
- foss-2023b.eb
- SciPy-bundle-2023.11-gfbf-2023b.eb
- netCDF-4.9.2-gompi-2023b.eb:
options:
from-pr: 19534
13 changes: 13 additions & 0 deletions eb_hooks.py
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Expand Up @@ -378,6 +378,18 @@ def pre_test_hook_ignore_failing_tests_SciPybundle(self, *args, **kwargs):
if self.name == 'SciPy-bundle' and self.version in scipy_bundle_versions and cpu_target == CPU_TARGET_NEOVERSE_V1:
self.cfg['testopts'] = "|| echo ignoring failing tests"

def pre_test_hook_ignore_failing_tests_netCDF(self, *args, **kwargs):
"""
Pre-test hook for netCDF: skip failing tests for selected netCDF versions on neoverse_v1
cfr. https://github.com/EESSI/software-layer/issues/425
The following tests are problematic:
163 - nc_test4_run_par_test (Timeout)
190 - h5_test_run_par_tests (Timeout)
A few other tests are skipped in the easyconfig and patches for similar issues, see above issue for details.
"""
cpu_target = get_eessi_envvar('EESSI_SOFTWARE_SUBDIR')
if self.name == 'netCDF' and self.version == '4.9.2' and cpu_target == CPU_TARGET_NEOVERSE_V1:
self.cfg['testopts'] = "|| echo ignoring failing tests"

def pre_single_extension_hook(ext, *args, **kwargs):
"""Main pre-extension: trigger custom functions based on software name."""
Expand Down Expand Up @@ -557,6 +569,7 @@ def inject_gpu_property(ec):
'ESPResSo': pre_test_hook_ignore_failing_tests_ESPResSo,
'FFTW.MPI': pre_test_hook_ignore_failing_tests_FFTWMPI,
'SciPy-bundle': pre_test_hook_ignore_failing_tests_SciPybundle,
'netCDF': pre_test_hook_ignore_failing_tests_netCDF,
}

PRE_SINGLE_EXTENSION_HOOKS = {
Expand Down
7 changes: 7 additions & 0 deletions eessi-2023.06-known-issues.yml
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Original file line number Diff line number Diff line change
@@ -0,0 +1,7 @@
- aarch64/neoverse_v1:
- netCDF-4.9.2-gompi-2023a.eb:
- issue: https://github.com/EESSI/software-layer/issues/425
- info: "netCDF intermittent test failures"
- netCDF-4.9.2-gompi-2023b.eb:
- issue: https://github.com/EESSI/software-layer/issues/425
- info: "netCDF intermittent test failures"